EY684555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 1.547e-36 Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG SDG+ Y VP +YSFP T +N W +V+GL+I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEKETAF 328 HSP 2 Score: 55.4546 bits (132), Expect = 1.547e-36 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V DVKNVIIWGNHSS+ YPDV+HA V E V + +KDD+ Sbjct: 173 VTSDDVKNVIIWGNHSSTQYPDVSHAKVKLHGKEVGVYDALKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 3.419e-36 Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMG SDG SY VP +YSFP +N W V+GL I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKETAF 328 HSP 2 Score: 59.6918 bits (143), Expect = 3.419e-36 Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V DVKNVIIWGNHSS+ YPDVNHA V E V E +KDD+ Sbjct: 173 VTADDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.454e-36 Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580 L GEFI+TVQ+RGAA+I ARK DH+ DWVLGT EG +VSMG YSDGSY VP G I+SFP C NG++TIVQGL +D+ + ++LT EEL EK Sbjct: 220 LQGEFISTVQKRGAAVIAARKLSSAASAAKAITDHMHDWVLGTAEGEYVSMGVYSDGSYGVPEGLIFSFPVKCANGKYTIVQGLQMDDLSKNLINLTTEELVAEK 324 HSP 2 Score: 52.7582 bits (125), Expect = 4.454e-36 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDD 258 V V DV NVIIWGNHSS+ YPD +N + G+ P+ +KD+ Sbjct: 174 VNVKDVHNVIIWGNHSSTQYPDYRCGYINLSTGKTPISTAIKDE 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.454e-36 Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 L GEFITTVQQRGAA+IKARK CDH+RD GTP+G +VSMG SDG SY +P +YSFP T +N W IV+GL I++ ++K+DLTA+EL EEK+ Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEKE 325 HSP 2 Score: 56.225 bits (134), Expect = 4.454e-36 Identity = 26/47 (55.32%), Postives = 31/47 (65.96%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDD 258 + V DVKNVIIWGNHSS+ YPD +HATVN + E VK+D Sbjct: 170 KLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKND 216
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 4.454e-36 Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMG SDG SY VP +YSFP +N W V+GL I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKETAF 328 HSP 2 Score: 59.6918 bits (143), Expect = 4.454e-36 Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V DVKNVIIWGNHSS+ YPDVNHA V E V E +KDD+ Sbjct: 173 VTADDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.670e-35 Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 L G+FI TVQQRGAA+IKARK CDH+RD GTP G +VSMG SDG SY VP +YSFP ++ W V+GL I++ ++K+DLTA+EL+EEK+ Sbjct: 219 LKGDFILTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEGLPINDFSREKMDLTAKELTEEKE 325 HSP 2 Score: 62.7734 bits (151), Expect = 1.670e-35 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V +DVKNVIIWGNHSS+ YPDVNHA VN E V E +KDD+ Sbjct: 173 VTSNDVKNVIIWGNHSSTQYPDVNHAKVNVKGKEVGVYEAIKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.348e-34 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L G FITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG SDG SY VP +YSFP T +N W IV+GL I++ ++K+D+TA+EL +EK+ + Sbjct: 219 LKGGFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEKETAF 328 HSP 2 Score: 52.373 bits (124), Expect = 2.348e-34 Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDD 258 + V DVKNVIIWGNHSS+ YPD +HA+V + E VK+D Sbjct: 170 KLNVASDDVKNVIIWGNHSSTQYPDASHASVTLQGKDVGAFEAVKND 216
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.349e-34 Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 ++I TVQQRGAAIIKAR DH+R W LGT EG WVSMG YSDGSY + G IYSFP TC+NG+WTIVQGL +++ + K+ T +EL+EE+D Sbjct: 219 DYIPTVQQRGAAIIKARGASSAASAANAAVDHMRSWALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEERD 321 HSP 2 Score: 44.669 bits (104), Expect = 2.349e-34 Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 133 VSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297 V+DVK ++IWGNHSS+ YPD++H V+ G+ + ++ +D W +++ PT Sbjct: 177 VNDVKKMLIWGNHSSTQYPDLHHCEVD---GKVAIDQVEQD-----WYENDYIPT 223
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.058e-34 Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 E+I TV +RGAAII+AR DH+RDW LGTPEG WVSM SDGSY +P G IY FP CRNG++ IVQGL I + ++K+D TA+EL EE++ Sbjct: 223 EYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEERE 325 HSP 2 Score: 50.8322 bits (120), Expect = 3.058e-34 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297 +T PVS +KN+ IWGNHSS+ YPD++ ATVN +P +LV EW + PT Sbjct: 176 KTGQPVSAIKNITIWGNHSSTQYPDLSQATVN----GQPALDLVDR----EWYEKEYIPT 227
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.144e-33 Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 LN +FI VQ RGA +I ARK H+RDW+LGT +G VSM YSDGSYNVP G I+SFP TC NG+WTIVQGL I+ S Q+K+D T +EL EEK+ Sbjct: 279 LNEQFIPLVQNRGATVIAARKLSSAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEKE 384 HSP 2 Score: 41.5874 bits (96), Expect = 1.144e-33 Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 1 Query: 133 VSDVKNVIIWGNHSSSHYPDVNHATVNTAAGE---KPVRELVKDD 258 V +V NVIIWGNHS + PDVNH + +P+ V DD Sbjct: 232 VDNVHNVIIWGNHSQTQVPDVNHGYILNYPNRGLIEPIPSSVNDD 276 The following BLAST results are available for this feature:
BLAST of EY684555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684555 ID=EY684555; Name=EY684555; organism=Citrus sinensis; type=EST; length=995bpback to top |