EY684555

Overview
NameEY684555
Unique NameEY684555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length995
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_LEGPH (Malate dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=mdh PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.428e-14
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
            L   F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  G I+SFP    +GE  +V+ L  ++  +++ + T  EL  E+D
Sbjct:  216 LKETFVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSERD 321          

HSP 2 Score: 35.8094 bits (81), Expect = 1.428e-14
Identity = 13/39 (33.33%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRE 243
            V ++ V  + IWGNHS++ YPD  +A +N  +  + + +
Sbjct:  174 VDITAVTQMTIWGNHSATQYPDFYNAKINGTSAAQVIND 212          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_LEGPC (Malate dehydrogenase OS=Legionella pneumophila (strain Corby) GN=mdh PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.428e-14
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
            L   F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  G I+SFP    +GE  +V+ L  ++  +++ + T  EL  E+D
Sbjct:  216 LKETFVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSERD 321          

HSP 2 Score: 35.8094 bits (81), Expect = 1.428e-14
Identity = 13/39 (33.33%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRE 243
            V ++ V  + IWGNHS++ YPD  +A +N  +  + + +
Sbjct:  174 VDITAVTQMTIWGNHSATQYPDFYNAKINGTSAAQVIND 212          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_LEGPA (Malate dehydrogenase OS=Legionella pneumophila (strain Paris) GN=mdh PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.428e-14
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
            L   F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  G I+SFP    +GE  +V+ L  ++  +++ + T  EL  E+D
Sbjct:  216 LKETFVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSERD 321          

HSP 2 Score: 35.8094 bits (81), Expect = 1.428e-14
Identity = 13/39 (33.33%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRE 243
            V ++ V  + IWGNHS++ YPD  +A +N  +  + + +
Sbjct:  174 VDITAVTQMTIWGNHSATQYPDFYNAKINGTSAAQVIND 212          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH1B_BRAFL (Putative malate dehydrogenase 1B OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.508e-13
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 2
Query:  230 SLSVSLSRMMHA---LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDL 586
            S S S+S M+H    L GEF+  +Q R   I  + +              +  W  G+PEG   S+   S+G YN+P G ++SFP     G W +VQ + ++E  +  L     +L EEKDL
Sbjct:  339 SYSCSVSEMVHDNKWLEGEFLEQLQSRSHTIQDSLQHSADLSMAAAISSTLSYWWNGSPEGQLFSLAVCSEGFYNIPEGVVFSFPVMFHKGSWEVVQDIDMNEDMRVMLSSITAQLVEEKDL 460          

HSP 2 Score: 27.7202 bits (60), Expect = 2.508e-13
Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 1
Query:  118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVN 213
            R  V  + V +VI+WGN   + Y DV+ A V+
Sbjct:  297 RLTVNSAGVCDVIVWGNVGGTTYTDVSRARVH 328          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_CHLFF (Malate dehydrogenase OS=Chlamydophila felis (strain Fe/C-56) GN=mdh PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.585e-12
Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSD-GSYNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L    + ++Q RG+A+I+AR             +  R  +    EG W S G  SD   Y +P   I+ FP  CR   +G++ I+ GLS D   + K+ ++ +E+S+EK
Sbjct:  217 LENIMLPSIQNRGSAVIEARGKSSAGSAARALAEAARS-IFVPKEGEWFSTGVCSDYNPYGIPEDLIFGFP--CRMLPSGDYEIIPGLSWDVFIKNKIQISLDEISQEK 322          

HSP 2 Score: 42.3578 bits (98), Expect = 1.585e-12
Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1
Query:  118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKD 255
            R +VP+ +V NV+IWGNHS+   PD   + ++     KP  E++ D
Sbjct:  172 RAQVPLDEVTNVVIWGNHSAKQVPDFTQSLIS----GKPAVEVISD 213          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHP_MEDSA (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa GN=MDH1 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 7.528e-12
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L  EF   VQ+RG A+I+               D IR  ++ TPEG W S G Y+ G+ Y +    ++S P  CR   +G++ +V+ +  D+  ++KL  T  EL  EK
Sbjct:  305 LEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLIIPTPEGDWFSTGVYTTGNPYGIAEDIVFSMP--CRSKGDGDYELVKDVIFDDYLRQKLAKTEAELLAEK 411          

HSP 2 Score: 36.965 bits (84), Expect = 7.528e-12
Identity = 17/43 (39.53%), Postives = 27/43 (62.79%), Query Frame = 1
Query:  142 VKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270
            V N+ IWGNHS++  PD  +A ++      PV+E++KD   +E
Sbjct:  268 VSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVIKDHKWLE 306          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_CHLTB (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=mdh PE=3 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 9.867e-12
Identity = 33/109 (30.28%), Postives = 53/109 (48.62%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L    + +VQ RG+A+I+AR             +  R  +    EG W S G  SD + Y +P   I+ FP  CR    GE+ ++ GL  D   + K+ ++ +E+ +EK
Sbjct:  216 LENIMVPSVQSRGSAVIEARGKSSAASAARALAEAARS-IYQPKEGEWFSSGVCSDHNPYGLPEDLIFGFP--CRMLATGEYEVIPGLPWDAFIRGKMQISLDEILQEK 321          

HSP 2 Score: 43.8986 bits (102), Expect = 9.867e-12
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKD 255
            R  VP+S V  V++WGNHS+   PD   A +N    ++P+ E + D
Sbjct:  171 RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETIAD 212          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_CHLT2 (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=mdh PE=3 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 9.867e-12
Identity = 33/109 (30.28%), Postives = 53/109 (48.62%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L    + +VQ RG+A+I+AR             +  R  +    EG W S G  SD + Y +P   I+ FP  CR    GE+ ++ GL  D   + K+ ++ +E+ +EK
Sbjct:  216 LENIMVPSVQSRGSAVIEARGKSSAASAARALAEAARS-IYQPKEGEWFSSGVCSDHNPYGLPEDLIFGFP--CRMLATGEYEVIPGLPWDAFIRGKMQISLDEILQEK 321          

HSP 2 Score: 43.8986 bits (102), Expect = 9.867e-12
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKD 255
            R  VP+S V  V++WGNHS+   PD   A +N    ++P+ E + D
Sbjct:  171 RAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETIAD 212          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHP1_SORBI (Malate dehydrogenase [NADP] 1, chloroplastic OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.269e-11
Identity = 34/109 (31.19%), Postives = 54/109 (49.54%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L  EF  TVQ+RG A+I+               D I+  V  TPEG W S G Y+ G+ Y +    ++S P  CR   +G++ +   +S+D+   +++  +  EL  EK
Sbjct:  297 LEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMP--CRSKGDGDYELATDVSMDDFLWERIKKSEAELLAEK 403          

HSP 2 Score: 39.2762 bits (90), Expect = 1.269e-11
Identity = 18/43 (41.86%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  142 VKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270
            V NV IWGNHS++  PD  +A ++     +PV+E++KD   +E
Sbjct:  260 VSNVTIWGNHSTTQVPDFLNAKID----GRPVKEVIKDTKWLE 298          
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHP_PEA (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 2.137e-11
Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = 2
Query:  266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCR---NGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
            L  EF   VQ+RG  +I+               D IR  +  TPEG W S G Y++G+ Y +    ++S P  CR   +G++ +V  +  D+  ++KL  T  EL  EK
Sbjct:  309 LEEEFTEKVQKRGGVLIQKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMP--CRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEK 415          

HSP 2 Score: 37.7354 bits (86), Expect = 2.137e-11
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  142 VKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270
            V N+ IWGNHS++  PD  +A ++      PV+E++KD+  +E
Sbjct:  272 VSNMTIWGNHSTTQVPDFLNARIDGL----PVKEVIKDNKWLE 310          
The following BLAST results are available for this feature:
BLAST of EY684555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
MDH_LEGPH1.428e-1435.85Malate dehydrogenase OS=Legionella pneumophila sub... [more]
MDH_LEGPC1.428e-1435.85Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_LEGPA1.428e-1435.85Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH1B_BRAFL2.508e-1332.79Putative malate dehydrogenase 1B OS=Branchiostoma ... [more]
MDH_CHLFF1.585e-1231.19Malate dehydrogenase OS=Chlamydophila felis (strai... [more]
MDHP_MEDSA7.528e-1233.03Malate dehydrogenase [NADP], chloroplastic OS=Medi... [more]
MDH_CHLTB9.867e-1230.28Malate dehydrogenase OS=Chlamydia trachomatis (str... [more]
MDH_CHLT29.867e-1230.28Malate dehydrogenase OS=Chlamydia trachomatis (str... [more]
MDHP1_SORBI1.269e-1131.19Malate dehydrogenase [NADP] 1, chloroplastic OS=So... [more]
MDHP_PEA2.137e-1132.11Malate dehydrogenase [NADP], chloroplastic OS=Pisu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684555 ID=EY684555; Name=EY684555; organism=Citrus sinensis; type=EST; length=995bp
GGGGGGGGGTGAGAGGTGTGNTGTGTAAACGCTTTATATTATTTAACCTT
TGTGTATGTGGGTNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GCTCAACCACGCGTCCGCGGACGCGTGTGCCCGTATCTGATGTTAAGAAT
GTGATTATTTGGGGAAATCATTCATCATCTCATTACCCTGATGTCAACCA
TGCAACTGTCAATACTGCAGCTGGGGAAAAGCCTGTCCGTGAGCTTGTCA
AGGATGATGCATGCGTTGAATGGAGAATTCATAACCACAGTCCAACAACG
TGGTGCTGCAATCATCAAAGCCAGAAAGCTCTCGAGTGCTCTGTCTGCTG
CTAGCTCTGCTTGTGACCATATCCGTGATTGGGTTCTTGGAACTCCTGAG
GGCACCTGGGTCTCCATGGGGGAATACTCTGATGGTTCATACAATGTACC
ACCTGGGCACATTTACTCATTCCCAAAAACCTGCCGCAACGGTGAATGGA
CAATAGTTCAAGGACTCAGCATTGATGAATCCTAACAGAAGAAATTGGAC
TTGACAGCAGAAGAACTCTCCGAGGAAAAAGACCTCACATACCCATGTCC
CCACTTAAATGCCTTCAACCCTTGCAGATTGTGAGTGACCAAGACCTCAA
ACTTAGTCTCAGAAGATAGCAAATATTACAGATTCACAAGAAAAGCCCTG
GTTGGAACTCGAGAGGAACGCATAGAGTAATGTGAAACACCTCCGCAACG
AAAGCTGGGGGCTCGCGGGCTGGAAATTATCGGGAATGGGACACGGGTAG
TAGCCCCCTCCAGGGAATAAGTGGAGATGCGATGATCACTGAACATAATC
TGCTATCCACCGCTCATCACCCCCTTTCCTATTTACAACACAACCAATAA
ACAAGCAAACAATTAATATATCATATAAATTGTCATAAAGAATAGTAAGA
CAAAATAAGATAAAAAATAAAAGGAATAAAAAACAGAGAGGTGTC
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