EY684555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.299e-33 Identity = 60/103 (58.25%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 E+I TVQQRGAAIIKAR H+RDW LG+PEG WVSMG YSDGSY + G IYSFP C+NG+W IVQGLSIDE Q ++ T EL E+D Sbjct: 217 EYIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGERD 319 HSP 2 Score: 41.9726 bits (97), Expect = 3.299e-33 Identity = 22/62 (35.48%), Postives = 31/62 (50.00%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE-----WRIHNHSPT 297 V ++D+ + IWGNHSS+ YPD+ HA LVK DA ++ W + PT Sbjct: 173 VSINDITKMTIWGNHSSTQYPDLYHA-------------LVKGDAAIDKVDSTWYAEEYIPT 221
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.236e-32 Identity = 60/103 (58.25%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 +FI TVQQRGAAIIKAR H+RDW LGTPE WVSMG YSDGSY + G IYSFP C+NG+W IVQGL+IDE + K+ T EL EE+D Sbjct: 217 DFIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGTPENDWVSMGVYSDGSYGIEEGLIYSFPCVCKNGDWEIVQGLTIDEFSRAKMTATENELKEERD 319 HSP 2 Score: 39.2762 bits (90), Expect = 1.236e-32 Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297 V + D+ + IWGNHS++ YPD+ H V G+ V ++ KD W ++ PT Sbjct: 173 VTLEDITKMTIWGNHSATQYPDLFHTLVK---GDVAVEQVEKD-----WYENDFIPT 221
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.610e-32 Identity = 57/103 (55.34%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 E+I TV +RGAAII+AR DH+RDW LGT EG WVSMG SDGSY VP G IY FP T ++G++ IVQGL I E + K+D TA EL EE+D Sbjct: 219 EYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEERD 321 HSP 2 Score: 49.6766 bits (117), Expect = 1.610e-32 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELV 249 +T PVS +KN+ IWGNHSS+ YPD++ ATV G +P +LV Sbjct: 172 KTGQPVSAIKNITIWGNHSSTQYPDLSQATV----GGRPALDLV 211
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.941e-31 Identity = 57/103 (55.34%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 ++I TVQQRGAAII AR +HIRDW LGTP WVSMG YSDGSY + G IYSFP C+NG+W IVQGL I+E + K+ T +EL EE+D Sbjct: 217 DYIPTVQQRGAAIIAARGASSAASAANAAINHIRDWALGTPANDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDINEFSRAKMTATEKELQEERD 319 HSP 2 Score: 39.6614 bits (91), Expect = 2.941e-31 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297 +T ++++ +IWGNHSS+ YPD++ NT KP LV D A W ++ PT Sbjct: 170 KTGTSINNITKALIWGNHSSTQYPDLH----NTLVDGKPALSLV-DQA---WYESDYIPT 221
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.942e-31 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 FI TVQQRGAAIIKAR DH+RDW LGTPEG W SM SDGSY + G IYSFP TCR G++ IV GLS+D+ + ++D TA EL+EE+D Sbjct: 218 FIPTVQQRGAAIIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEERD 319 HSP 2 Score: 38.891 bits (89), Expect = 2.942e-31 Identity = 14/41 (34.15%), Postives = 27/41 (65.85%), Query Frame = 1 Query: 136 SDVKNVIIWGNHSSSHYPDVNHATV-NTAAGEKPVRELVKD 255 ++++ + +WGNHS++ YPD++H T+ A ++ VKD Sbjct: 176 TEIRGLAVWGNHSATQYPDISHCTIQGRPAADQVEHAWVKD 216
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.831e-31 Identity = 59/103 (57.28%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 +FI TVQQRGAAIIKAR DHIRDWVLGTPEG W SM SDGSY + G IYS+P CRNG++ IVQ L IDE ++K+ T +EL EE+D Sbjct: 217 DFIPTVQQRGAAIIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEERD 319 HSP 2 Score: 39.2762 bits (90), Expect = 3.831e-31 Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 136 SDVKNVIIWGNHSSSHYPDVNHATVNTAA 222 +++KN+IIWGNHS++ YPD++ V A Sbjct: 176 TEIKNMIIWGNHSATQYPDISKTKVKGEA 204
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.101e-30 Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 ++I TV +RGAAII+AR DH+ DW LGT +G WVSMG SDGSY +P G IY FP ++G++ IVQGL + + + K+D TA+EL EE+D Sbjct: 219 DYIPTVAKRGAAIIEARGASSAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLIYGFPVRVKDGKYEIVQGLDVSDFSRGKMDATAQELEEERD 321 HSP 2 Score: 51.2174 bits (121), Expect = 1.101e-30 Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297 +T VSD+KNV IWGNHSS+ YPD++ ATVN KP E V W +++ PT Sbjct: 172 KTGAAVSDIKNVTIWGNHSSTQYPDLSQATVN----GKPALEQVDR----TWYENDYIPT 223
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.122e-30 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 272 GEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QK-KLDLTAEELSEEKD 583 G +I VQQRGAAIIKAR H+R WV+GT E WVSMG YS+G Y + G IYSFP TC NG+W+IV G+ + K K+ T +ELSEE+D Sbjct: 218 GTYIPEVQQRGAAIIKARGASSAASAANAAIAHVRTWVMGTDENDWVSMGVYSNGEYGIAKGLIYSFPVTCANGDWSIVDGVDVSSDFSKEKMAATEQELSEERD 322 HSP 2 Score: 46.595 bits (109), Expect = 4.122e-30 Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELV 249 +T V+DVK +IIWGNHSS+ YPD+ +TVN KP +LV Sbjct: 172 KTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN----GKPALDLV 211
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 9.100e-30 Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583 + +FI TV +RGAAII AR D RDW+LGTP G WVSM SDGSY VP G I SFP T ++G+WTIVQGL IDE + ++D T EL++E++ Sbjct: 216 IENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADERN 321 HSP 2 Score: 43.8986 bits (102), Expect = 9.100e-30 Identity = 21/51 (41.18%), Postives = 30/51 (58.82%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270 +T V+D+K + IWGNHS++ YPD+ HA V K E+V D +E Sbjct: 171 KTGAKVTDIKKMTIWGNHSATQYPDIFHAEVK----GKNAAEVVGDQNWIE 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.100e-30 Identity = 54/105 (51.43%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 272 GEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QK-KLDLTAEELSEEKD 583 G +I VQQRGAAIIKAR H+R WVLGT E WVSMG YS+G Y + G IYSFP TC NG+W+IV G+ + + K K+ T +ELSEE+D Sbjct: 218 GTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEERD 322 HSP 2 Score: 45.4394 bits (106), Expect = 9.100e-30 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVN 213 +T V+DVK +IIWGNHSS+ YPD+ +TVN Sbjct: 172 KTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN 203 The following BLAST results are available for this feature:
BLAST of EY684555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684555 ID=EY684555; Name=EY684555; organism=Citrus sinensis; type=EST; length=995bpback to top |