EY684555
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_ECHGR (Malate dehydrogenase, cytoplasmic OS=Echinococcus granulosus GN=MDH PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.473e-25 Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGS-YNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDL 586
FI VQ RGAA+I RK D +RDW GT EG WVSM YS G Y P +SFP T ++G + +V GLS+DE + +L+A+EL +E+++
Sbjct: 223 FIPCVQNRGAAVIGLRKLSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTGDHYGAPKDIYFSFPVTIKDGHYKVVDGLSMDEWSRSLFNLSADELVDEREV 326 HSP 2 Score: 52.7582 bits (125), Expect = 3.473e-25 Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270
VP + VKNV IWGNHS+ +PD++HA V + P +EL+ D+ V+
Sbjct: 173 VPNTCVKNVCIWGNHSNKQFPDLSHAVVTKDGKQHPAKELINDEKWVK 220
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.883e-25 Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
F+ TV +RGAAII+AR DH+RDW LGT G WV+MG SDGSY +P G IY P TC NGE+ V+GL IDE ++++D T +EL EE+
Sbjct: 221 FLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEER 320 HSP 2 Score: 35.4242 bits (80), Expect = 5.883e-25 Identity = 20/57 (35.09%), Postives = 30/57 (52.63%), Query Frame = 1
Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
V V+D++ + +WGNHS + Y D AT N GE +++ + D EW PT
Sbjct: 175 VAVADIEKLTVWGNHSPTMYADYRFATAN---GEN-LKDKIND---AEWNKDVFLPT 224
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_BURCM (Malate dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=mdh PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.883e-25 Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
FI TV +RGAAII+AR DH+RDWVLGT G WV+MG SDGSY +P IY P C NGE+ V+GL ID ++K+D T EL EE+D
Sbjct: 220 FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVVCENGEYKRVEGLEIDAFSREKMDGTLAELLEERD 320 HSP 2 Score: 38.5058 bits (88), Expect = 5.883e-25 Identity = 21/56 (37.50%), Postives = 30/56 (53.57%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV+ ++ + +WGNHS + YPD A TA GE + +L+ DD W PT
Sbjct: 175 PVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDV---WNRDTFIPT 223
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.883e-25 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
FI TV +RGAAII+AR DH+RDW+LG+ G W++MG SDGSY +P G I+ FP T NGE++IV+ L ID + +D T EL EE+
Sbjct: 221 FIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEER 320 HSP 2 Score: 43.5134 bits (101), Expect = 5.883e-25 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV++++ +I+WGNHS + YPD AT A P+ E + D A W ++ PT
Sbjct: 176 PVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQA---WNANSFIPT 224
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.883e-25 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
FI TV +RGAAII+AR DH+RDW+LG+ G W++MG SDGSY +P G I+ FP T NGE++IV+ L ID + +D T EL EE+
Sbjct: 221 FIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEER 320 HSP 2 Score: 43.5134 bits (101), Expect = 5.883e-25 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV++++ +I+WGNHS + YPD AT A P+ E + D A W ++ PT
Sbjct: 176 PVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQA---WNANSFIPT 224
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_XYLF2 (Malate dehydrogenase OS=Xylella fastidiosa (strain M23) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.883e-25 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
FI TV +RGAAII+AR DH+RDW+LG+ G W++MG SDGSY +P G I+ FP T NGE++IV+ L ID + +D T EL EE+
Sbjct: 221 FIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEER 320 HSP 2 Score: 43.5134 bits (101), Expect = 5.883e-25 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV++++ +I+WGNHS + YPD AT A P+ E + D A W ++ PT
Sbjct: 176 PVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQA---WNANSFIPT 224
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_SYNFM (Malate dehydrogenase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mdh PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.883e-25 Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 275 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
E+I V +RGAAII+AR DH+ DW LGT G WV+MG SDGSY +P G +Y P TC G++ V+GL ID ++K+D T +EL+EE+
Sbjct: 221 EYIPKVGKRGAAIIEARGLSSAASAANAAIDHMHDWALGT-NGKWVTMGLPSDGSYGIPEGTMYGVPVTCTPGKYERVKGLEIDAFSREKMDFTLKELTEEQ 321 HSP 2 Score: 45.0542 bits (105), Expect = 5.883e-25 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261
RT PV+ V+ +I+WGNHS + YPD+ TV+ +P +LV D+A
Sbjct: 173 RTGKPVASVEKMIVWGNHSPTMYPDIRFCTVD----GQPAVKLVNDEA 216
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.884e-25 Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEK 580
F+ TV +RGAAII+AR DHIRDWVLGT G WV+MG SDGSY +P G +Y P C NGE+ V+GL ID ++++DLT EL EE+
Sbjct: 219 FLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEER 318 HSP 2 Score: 36.5798 bits (83), Expect = 5.884e-25 Identity = 15/47 (31.91%), Postives = 28/47 (59.57%), Query Frame = 1
Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDD 258
+T PV+ ++ + +WGNHS + Y D AT++ + V+ ++ DD
Sbjct: 170 KTGKPVASIEKLAVWGNHSPTMYADYRFATID----GQSVKAMINDD 212
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.657e-25 Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
FI TV +RGAAII+AR DH+RDWVLGT G WV+MG SDGSY +P IY P C NGE+ ++GL ID ++K+D T EL EE+D
Sbjct: 220 FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVVCENGEYKRIEGLEIDAFSREKMDGTLAELLEERD 320 HSP 2 Score: 38.5058 bits (88), Expect = 7.657e-25 Identity = 21/56 (37.50%), Postives = 30/56 (53.57%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV+ ++ + +WGNHS + YPD A TA GE + +L+ DD W PT
Sbjct: 175 PVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDV---WNRDTFIPT 223
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDH_BURPS (Malate dehydrogenase OS=Burkholderia pseudomallei GN=mdh PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 7.657e-25 Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 278 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKD 583
FI TV +RGAAII+AR DH+RDWVLGT G WV+MG SDGSY +P IY P C NGE+ V+GL ID ++K+D T EL EE+D
Sbjct: 220 FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVICENGEYKRVEGLEIDAFSREKMDGTLAELLEERD 320 HSP 2 Score: 38.5058 bits (88), Expect = 7.657e-25 Identity = 21/56 (37.50%), Postives = 30/56 (53.57%), Query Frame = 1
Query: 130 PVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEWRIHNHSPT 297
PV+ ++ + +WGNHS + YPD A TA GE + +L+ DD W PT
Sbjct: 175 PVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDV---WNRDTFIPT 223 The following BLAST results are available for this feature:
BLAST of EY684555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684555 ID=EY684555; Name=EY684555; organism=Citrus sinensis; type=EST; length=995bpback to top |