EY684548

Overview
NameEY684548
Unique NameEY684548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_KLEP7 (Endonuclease V OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nfi PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701
            IGG D+ F +E   I    +V+L    L++V    + +   +PY+PGFL+FRE P LL+  + + ++     P +L VDG+G+ HPR  G+ASH G++ D+ TIGV K
Sbjct:   31 IGGADVGFEQEG-EITRAAMVLLTWPELELVEYQVARVATSMPYIPGFLSFRETPALLAAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK 132          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_GLOVI (Endonuclease V OS=Gloeobacter violaceus GN=nfi PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.252e-16
Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  378 IGGVDMSFSKEDP-SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNV 707
            + GVD+SF+  +P ++    +VVL    L++V        +  PY+PG L+FREAP +L+ +  + ++     P +++VDG+G  HPR  G+ASH+G+  DL TIG  K++
Sbjct:   46 VAGVDVSFNPREPKALVHAVVVVLSYPGLEVVDRQAVSAAVDFPYIPGLLSFREAPPILAAIGQLSQK-----PDLVIVDGHGYAHPRRLGIASHLGLFLDLPTIGCAKSI 151          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_BACHK (Endonuclease V OS=Bacillus thuringiensis subsp. konkukian GN=nfi PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.252e-16
Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = 3
Query:  369 LKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNV----NIDYTAPCGWSNTFWD 755
            +++I GVD+++ +         CIV++D  T ++V + YS   + +PY+PGFLAFRE P+++  +  + K+     P +   DGNG LH R  G+A+H   L +  TIGV K+     ++D+  P     ++ D
Sbjct:   38 IQFIAGVDLAYWNVNKTKYGTCCIVIIDYGTKEVVEKVYSYGEIPIPYIPGFLAFRELPLIIEAVKKLTKQ-----PDIYFFDGNGYLHYRHMGIATHASFLLNKPTIGVAKSYLKIRDVDFIMPENLKGSYTD 166          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_YERE8 (Endonuclease V OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=nfi PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.078e-15
Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  369 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNVNIDYTAPCGWSN 743
            +++I G D+ F ++   +    I VL   +L++V    + +   +PY+PG L+FRE P LL+    +++R     PQ++ VDG G+ HPR  G+ASH G+L D+ TIGV K+       P G  N
Sbjct:   29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQVARVATSLPYIPGLLSFREYPALLAAWAQIQQR-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGNFEPLGDDN 147          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_KLEP3 (Endonuclease V OS=Klebsiella pneumoniae (strain 342) GN=nfi PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.078e-15
Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701
            IGG D+ F +E   +    +V+L    L++V    + +   +PY+PGFL+FRE P LL+  + + ++     P +L VDG+G+ HPR  G+ASH G++ D+ TIGV K
Sbjct:   31 IGGADVGFEQEG-EVTRAAMVLLTWPELELVEYQVARVATTMPYIPGFLSFRETPALLAAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK 132          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_PHOLL (Endonuclease V OS=Photorhabdus luminescens subsp. laumondii GN=nfi PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  372 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701
            K I G D+ F ++  +I    I VL    L++V    + +   +PY+PG L+FRE P L++    +K     + P ++MVDG+G+ HPR  G+ASH G+LA++ TIGV K
Sbjct:   28 KLIAGADVGFERQG-AITRAAIAVLSYPALELVEYQIARIETTLPYIPGLLSFREYPALMAAWQLLK-----YKPDLVMVDGHGIAHPRRLGVASHFGLLANVPTIGVAK 131          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_PECCP (Endonuclease V OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=nfi PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15
Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 3
Query:  375 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKN 704
            +I G D+ F +E  S+    I V+   +L++V    + +   +PY+PGFL+FRE P LL+    ++++     P +L VDG+G+ HPR  G+ASH G+L D+ TIGV K+
Sbjct:   31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELVEYKIARISTTMPYIPGFLSFRECPGLLAAWALLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS 134          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_NOCFA (Endonuclease V OS=Nocardia farcinica GN=nfi PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.401e-15
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNVNIDYTAP 728
            + GVD ++  +   +    +VVLD  TL+ +    +   ++ PYVPG LAFRE P  LS L+ ++       P +L+ D  GL HPR FGLA H+GV   L TIGV KN    +T P
Sbjct:   39 VAGVDSAYD-DAAGLVATAVVVLDTATLEPIESAVAHGPVRFPYVPGLLAFRELPTTLSALEQLRTT-----PDLLVCDAQGLAHPRRFGLACHVGVRTGLPTIGVAKNAWGAWTEP 149          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_SERP5 (Endonuclease V OS=Serratia proteamaculans (strain 568) GN=nfi PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.136e-15
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  375 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701
            +I G D+ F +E  ++    I +L   +L++V    + +   +PY+PGFL+FRE P LL+  + +     H  P +++VDG+G+ HPR  G+ASH G+L ++ TIGV K
Sbjct:   31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQVARVATTMPYIPGFLSFREYPALLAAWEQL-----HQKPDLVLVDGHGISHPRRLGVASHFGLLVNVPTIGVAK 133          
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ENTS8 (Endonuclease V OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=nfi PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.096e-15
Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 3
Query:  378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701
            IGG D+ F ++   +    +V+L   +L+++    + +   +PY+PGFL+FRE P LL+  + + ++     P +L VDG+G+ HPR  G+ASH G+L D+ TIGV K
Sbjct:   31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELLEYQVARIPTTMPYIPGFLSFREYPALLTAWEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK 132          
The following BLAST results are available for this feature:
BLAST of EY684548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
NFI_KLEP76.319e-1639.81Endonuclease V OS=Klebsiella pneumoniae subsp. pne... [more]
NFI_GLOVI8.252e-1636.94Endonuclease V OS=Gloeobacter violaceus GN=nfi PE=... [more]
NFI_BACHK8.252e-1632.84Endonuclease V OS=Bacillus thuringiensis subsp. ko... [more]
NFI_YERE81.078e-1536.00Endonuclease V OS=Yersinia enterocolitica serotype... [more]
NFI_KLEP31.078e-1538.89Endonuclease V OS=Klebsiella pneumoniae (strain 34... [more]
NFI_PHOLL1.838e-1539.09Endonuclease V OS=Photorhabdus luminescens subsp. ... [more]
NFI_PECCP1.838e-1539.09Endonuclease V OS=Pectobacterium carotovorum subsp... [more]
NFI_NOCFA2.401e-1540.17Endonuclease V OS=Nocardia farcinica GN=nfi PE=3 S... [more]
NFI_SERP53.136e-1537.61Endonuclease V OS=Serratia proteamaculans (strain ... [more]
NFI_ENTS84.096e-1537.96Endonuclease V OS=Enterobacter sakazakii (strain A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684548 ID=EY684548; Name=EY684548; organism=Citrus sinensis; type=EST; length=945bp
TCCGACCCACGCGTCCGCTTTATGTTTCCACTGTACAATCCAGAAACAAT
TTTTTTTTTTTTTTTAAAAGGAAAAGAATTCAGGAGTGCAGCAGCCACAT
CATCGAAGAGAATTTCATTCAATCCCCGAGCAAATGTCTTCTTGTTACAG
ATCGTACATGGAAAATTATTGTGAAGAAGAAAGGGAAGCACTAGCATCGC
CCGATCCTGCTGCTCAAGCTCAGCTCAATCAGTGGACAGATTGGCAATGG
TAAATTCAGGATTCAGGACGAGCTAAAAAAGAGATTAATAACTGAAGATT
TTTTTACTTGGAATTTACCGAACTCCACAACCACAAACACGAGCACAAAA
GAAGAAGAAGAGGTGTTGCTGAAGTATATTGGTGGTGTTGATATGAGCTT
CTCAAAGGAAGATCCATCAATTGCATGTGGTTGCATTGTTGTGTTGGACC
TCCAAACTCTGCAAATAGTCTATGAGGATTATTCTCTTCTCAGGCTTCAA
GTGCCTTATGTCCCTGGTTTCCTTGCATTTCGCGAGGCTCCGGTTCTTTT
ATCGCTTCTGGATAACATGAAAAAGAGGGCTAACCATTTTTACCCACAGG
TATTAATGGTTGATGGCAATGGACTACTCCATCCTCGAGGTTTTGGCTTG
GCCAGTCACATCGGTGTTCTGGCGGATCTTACTACAATTGGGGTTGGAAA
GAATGTGAATATTGACTACACTGCCCCATGTGGATGGTCTAACACATTCT
GGGATAAGGCAACTACTTGATGCACAAGNAACAATAATGAAGATATTAAT
CCTTTGATGGGAGGCTCAGGATCCACATGGGGAAGGGGCAATGAGATCAA
CTCCAAACCATTTGAAGCCTAATTTTATTTCCGGTGGGCCCCTGCATTTC
CCCTGGATAGTGCTGCCATGGATGGTAAAAAGGACTGCCAGGAAT
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