EY684548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ECO27 (Endonuclease V OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nfi PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.655e-14 Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G+L D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_SHIB3 (Endonuclease V OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nfi PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G++ D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ECOSE (Endonuclease V OS=Escherichia coli (strain SE11) GN=nfi PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G++ D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ECOHS (Endonuclease V OS=Escherichia coli O9:H4 (strain HS) GN=nfi PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G++ D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_ECO24 (Endonuclease V OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=nfi PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G++ D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_CITK8 (Endonuclease V OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nfi PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 I G D+ F ++ + +V+L L++V + + +PY+PGFL+FRE P LL+ + + ++ P ++ VDG+G+ HPR G+ASH G++ D+ TIGV K Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLTYPALELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMMDVPTIGVAK 132
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_PETMO (Endonuclease V OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=nfi PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 378 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNVNI-DYTAP 728 + GVD+SF K++ IV +D + L ++ Y++ ++ +PY+PG LAFRE P+ L + ++ P ++ DG G HPR G+A+H + TIG+ K+ I +Y P Sbjct: 39 VSGVDLSFPKDE---GLAVIVTMDFKKLSVIDVTYAVDKITLPYIPGLLAFRELPIFLKAWEKLE-----IEPDIVFFDGQGYAHPRRMGIATHASFFIEKPTIGIAKSKLIGEYEEP 148
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_DESK1 (Endonuclease V OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=nfi PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 369 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 ++ + GVD S+ + G V++D + + + +PYVPG LAFREAPV + L + + P +++VDG+GL HPR FG+A+HIG++ +IGV K Sbjct: 34 IRSVAGVDASYRG---GVQVGSAVLMDYRAKMPLAYTCLTSKPPIPYVPGLLAFREAPVYIKALHRLPAK-----PDIILVDGHGLSHPRAFGIATHIGLVLSTPSIGVAK 136
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_BACSU (Endonuclease V OS=Bacillus subtilis GN=nfi PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 384 GVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGK 701 GVD+++ ++D P C CI+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++ ++ P V + DGNG LH G+A+H TIG+ K Sbjct: 44 GVDLAYWEQDGEPYGVC-CIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145
BLAST of EY684548 vs. ExPASy Swiss-Prot
Match: NFI_THEM4 (Endonuclease V OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=nfi PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.935e-13 Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 369 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLADLTTIGVGKNV 707 + + GVD+SF K+ IV+LD + ++++ + + ++ PY+PG LAFRE P+ L K+ NH V+ DG+G+ HPR G+ASH+G+ + TIG+ K + Sbjct: 36 INLVAGVDLSFVKD---YGLAVIVILD-KNMELIKVYHHIEKITFPYIPGLLAFREGPIFLKAW----KKVNHNV-DVVFFDGHGISHPRSMGIASHMGLWIEQPTIGIAKKI 139 The following BLAST results are available for this feature:
BLAST of EY684548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684548 ID=EY684548; Name=EY684548; organism=Citrus sinensis; type=EST; length=945bpback to top |