EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_NITOC (Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14
Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQL--GVPEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT + L LR A +LI   L R  + L A A+R   T + G T LQ A PVT G  +  W   + R   RL++ + R+ VL  G A     AL     P+ +A  AEL    G+ E      + RD  +EF +   L+   L +   ++ L    +   +  P     G SS MP K+NP    ++     RV G + ++ + M
Sbjct:  113 GRSRNDQIATDIRLYLRDAIDLITAQLQRLQEGLLAIAEREAATIMPGFTHLQTAQPVTFGHHLMAWFEMLLRDTGRLADCRHRVNVLPLGAA-----ALAGTTFPIDRAYTAELLGFDGIAENSLDAVSDRDFAIEFTAAGALLMTHLSRFAEELVLWSSAQFDFITLPDRFCTG-SSIMPQKKNPDVPELVRGKTGRVNGHLVSLLTLM 317          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_HALHL (Argininosuccinate lyase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14
Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPV-AQALAAELQLGVPEQ---PWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT + L LR A + I  +LAR+   L   A+R   T + G T LQ A PVT G  +  W   + R R RL++ + RL     G      AAL   + P+  +A A EL    P +      + RD  +EF +   LI   L ++  ++ L    +   +  P      GSS MP K+NP  A ++   A R  G +  + + M
Sbjct:  114 GRSRNDQIATDVRLFLREAIDTIRAELARFQHGLVELAEREADTIMPGFTHLQVAQPVTFGHHMLAWYEMLERDRDRLADCRRRLNQCPLGA-----AALAGTSFPIDREATARELGFDAPTRNSLDSVSDRDFAIEFCADASLILVHLSRMAEELVLWTSQQFGFIELPDR-FCTGSSIMPQKKNPDVAELVRGKAARAQGSLVQLLTLM 318          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_HELPJ (Adenylosuccinate lyase OS=Helicobacter pylori J99 GN=purB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.499e-13
Identity = 59/229 (25.76%), Postives = 97/229 (42.36%), Query Frame = -3
Query:   58 FGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEI 744
            +G   SD + T + L +  + +LI+  +    + L  +A  +  T + GR+      P+T G+ +A +   + R  + L      + V    GA G  A    +   +A          +  Q    QRDR    A  L L+A S  K+  +I  L ++E  EV E  + G+ GSS MPHKRNP+ +  +      +      M   +   HER +     E   LP++
Sbjct:   90 YGITSSDCIDTAMALLMTKSLKLIQKGVKNLYETLKNRALEHQDTLMVGRSHGVFGEPITFGLVLALFADEIKRHLKALDLTMEFISVGAISGAMGNFAHAPLELEELACGFLGLKTANISNQV--IQRDRYARLACDLALLASSCEKIAVNIRHLQRSEVYEVEEAFSAGQKGSSAMPHKRNPILSENITGLCRVIRSFTTPMLENVALWHERDMSHSSVERFALPDL 316          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_HELPY (Adenylosuccinate lyase OS=Helicobacter pylori GN=purB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 59/229 (25.76%), Postives = 97/229 (42.36%), Query Frame = -3
Query:   58 FGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEI 744
            +G   SD + T + L +  + +LI+  +    + L  +A  +  T + GR+      P+T G+ +A +   + R  + L      + V    GA G  A    +   +A          +  Q    QRDR    A  L L+A S  K+  +I  L ++E  EV E  + G+ GSS MPHKRNP+ +  +      +      M   +   HER +     E   LP++
Sbjct:   90 YGITSSDCIDTAMALLMTKSLKLIQKGVKNLYETLKNRALEHKDTLMVGRSHGVFGEPITFGLVLALFADEIKRHLKALDLTMEFISVGAISGAMGNFAHAPLELEELACEFLGLKTANISNQV--IQRDRYARLACDLALLASSCEKIAVNIRHLQRSEVYEVEEAFSTGQKGSSAMPHKRNPILSENITGLCRVIRSFTTPMLENVALWHERDMSHSSVERFALPDL 316          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_CHRSD (Argininosuccinate lyase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=argH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13
Identity = 61/216 (28.24%), Postives = 102/216 (47.22%), Query Frame = -3
Query:  112 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWH------TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQE 741
            GR ++D +AT + L LR A ++++ +LAR  + L   A R   T + G T LQ A PVT G  +  W   + R  +RL + + R+ V+  G      AAL     P+ + + AEL LG  E+P        + RD  +EF +   ++   + ++  ++ L    +   +  P      GSS MP K+NP    ++     RV G +  + + M  +
Sbjct:  110 GRSRNDQIATDIRLYLRDAIDVVDAELARLREGLIELAAREADTIMPGFTHLQTAQPVTFGHHLLAWQEMLARDHERLRDCRKRVNVMPLGA-----AALAGTTYPIDRHITAEL-LGF-ERPAENSLDAVSDRDFAIEFGAFASVLLMHMSRMSEELVLWTSAQFDFIDLPDR-FCTGSSIMPQKKNPDVPELVRGKTGRVYGHLMGLLTLMKSQ 317          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_DEIRA (Fumarate hydratase class II OS=Deinococcus radiodurans GN=fumC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13
Identity = 67/214 (31.31%), Postives = 97/214 (45.33%), Query Frame = -3
Query:  115 MATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWH-----------TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQ 720
            M   +VL+L    E +   + +  D L A+A++Y      GRT LQ ATP+TLG +I GW+  +  +   +      LL L  G   GT    G  A P    LAA+      E  +H           +  D LV+ ++ L  +AG+L K+  D+  L       + E + P  + GSS MP K NP  +  +   ATRV G  AT+  A  Q
Sbjct:  150 MHIAVVLELN---ERLYGAVGKLRDTLHAKAEQYKDLVKVGRTHLQDATPITLGQEIGGWVAQLDYALSEVKHAGEGLLDLAIG---GTAVGTGLNAHPKFGDLAAKKY--EEETGYHFRSAENKFAALSAHDALVQTSAALRTLAGALMKMANDVRWLASGPRNGIGEITIPENEPGSSIMPGKVNPTQSEAMTMVATRVFGNDATVAFAGSQ 355          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_THETN (Argininosuccinate lyase OS=Thermoanaerobacter tengcongensis GN=argH PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT   L LR   + I+ DL +  D L   A+ Y  T + G T LQ A PVT G  +  ++    R   RL ++  R+ V+  G  +            VA  L  +  + +      + RD ++EF S   +    L +   ++ +L  T+  +  E       GSS MP K+NP  A ++     RV G + T+ + M
Sbjct:  102 GRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTLKEMAETYKETIMPGYTHLQRAQPVTFGHYLLAYVEMFKRDLSRLDDMMKRVNVMPLGSGALAGTTFNIDRYYVASLLGFD-DITLNSMDGVSDRDFVIEFLSFASITMMHLSRFCEEL-ILWSTKEFDFIEMDDRFSTGSSMMPQKKNPDAAELIRGKTGRVYGDLITILTVM 306          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_CLAMS (Argininosuccinate lyase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=argH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.620e-12
Identity = 68/219 (31.05%), Postives = 100/219 (45.66%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATR----VPGLVATMFSAMPQEHERSL 741
            GR ++D +AT + + LR    +I   L +  D LAAQA+  G   + GRT LQHA PV L   +      + R  +RL++   R  V  +G  +   + LG  A  VA+ L    +           RD + EFA VL  +   L +L  +I +L  T        S     GSS MP K+NP  A +    + R    + GL+AT+   +P  + R L
Sbjct:  120 GRSRNDQIATLVRMYLRDHAAVIHAMLVQLVDALAAQAEAAGGAIMPGRTHLQHAQPVLLAHHLLAHCWPLVRDLERLADWDARADVSPYGSGALAGSTLGLDASAVARDLGF-ARSSENSIDGTAARDVVAEFAFVLAQVGIDLSRLSEEI-ILWNTREFGFVTLSDSFSTGSSIMPQKKNPDIAELARGKSGRLIGNLSGLLATL-KGLPLAYNRDL 335          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_ACIC1 (Argininosuccinate lyase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=argH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.620e-12
Identity = 69/222 (31.08%), Postives = 94/222 (42.34%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPV-AQALAAELQLGVPEQ---PWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPG---LVATMFSAMPQEHERSL 741
            GR ++D +AT L L LR    L+   L      L  QA+R+   P  G T LQHA PV     +   + A  R   R  +   R  +   G       AL   ++P+   A+AAEL    P        + RD   EFA    L+   L +LG +I L    E   V    A   G SS MP K+NP  A +    A R+ G    + TM   +P  ++R L
Sbjct:  124 GRSRNDQIATDLRLYLRDHVRLLVRRLVDLQWALVDQAERHLDLPAPGMTHLQHAQPVLFAHHLLAHVAAFARDVDRFRDWDRRAAICPLGAG-----ALAGSSLPLDPHAVAAELGFTAPAANSIDAVSDRDFAAEFAFAAALVGVHLSRLGEEIVLWCSQEFGWVELDDAYATG-SSIMPQKKNPDVAELARGKAGRLIGNLTSLLTMLKGLPLAYDRDL 339          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAR (Fumarate hydratase class II OS=Staphylococcus aureus (strain MRSA252) GN=fumC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 67/204 (32.84%), Postives = 94/204 (46.08%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VAQ ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAQYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ARLY_NITOC3.855e-1430.81Argininosuccinate lyase OS=Nitrosococcus oceani (s... [more]
ARLY_HALHL5.035e-1430.81Argininosuccinate lyase OS=Halorhodospira halophil... [more]
PUR8_HELPJ2.499e-1325.76Adenylosuccinate lyase OS=Helicobacter pylori J99 ... [more]
PUR8_HELPY3.263e-1325.76Adenylosuccinate lyase OS=Helicobacter pylori GN=p... [more]
ARLY_CHRSD7.270e-1328.24Argininosuccinate lyase OS=Chromohalobacter salexi... [more]
FUMC_DEIRA9.495e-1331.31Fumarate hydratase class II OS=Deinococcus radiodu... [more]
ARLY_THETN1.240e-1227.54Argininosuccinate lyase OS=Thermoanaerobacter teng... [more]
ARLY_CLAMS1.620e-1231.05Argininosuccinate lyase OS=Clavibacter michiganens... [more]
ARLY_ACIC11.620e-1231.08Argininosuccinate lyase OS=Acidothermus cellulolyt... [more]
FUMC_STAAR2.115e-1232.84Fumarate hydratase class II OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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