EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_SYNPX (Argininosuccinate lyase OS=Synechococcus sp. (strain WH8102) GN=argH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 72/256 (28.12%), Postives = 114/256 (44.53%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHT-----QRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGL---VATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALH-QAQLVSEGLE 741
            GR ++D + T L L LR   + I+ DL R    L  QA R+ +T + G T LQ A P+ L   +  ++  + R RQRL +++ R+ +   G A     AL    +P+ +   AE  LG      ++      RD  VEF++   L+   L +L  ++ +   +E       S     GSS MP K+NP    ++     RV G    + TM   +P  + +    +  + E L +  R     +   A L  EGLE
Sbjct:  114 GRSRNDQVGTDLRLWLRRRLDEIDGDLQRLQRALLDQADRHQSTMIPGYTHLQRAQPLCLAHHLLAYIEMLQRDRQRLGDVRGRVNICPLGAA-----ALAGTPVPIDRRRTAE-DLGFTAIYANSLDAVSDRDFCVEFSAAASLVMAHLSRLAEEV-IAWASEEFGFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGLPLAYNKD---FQEDKEALFDAYRTTRDCVEAMAILFEEGLE 359          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_LEIXX (Argininosuccinate lyase OS=Leifsonia xyli subsp. xyli GN=argH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 66/220 (30.00%), Postives = 98/220 (44.55%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQAL--AAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVA---TMFSAMPQEHERSL 741
            GR ++D +AT + L LR    +I   L    D +AAQA+ + TT L GRT LQHA PV L   +      + R  +RL++   R  V  +GG +   + LG   + VA+ L  AA  +  +        RD + EF  +   I   L +   +I +L  T              GSS MP K+NP  A +    + R+ G +    T    +P  + R L
Sbjct:  116 GRSRNDQIATLVRLYLRDHAGVIAERLIALVDAIAAQAEAHPTTILPGRTHLQHAQPVLLAHHLLAHCWPLVRDLERLADWDKRANVSPYGGGALAGSTLGLDPLLVARELGFAASSENSIDGT---AARDVVAEFVFIAAQIGVDLSRFAEEI-ILWNTREFGFVTLDDSYSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLTTLKGLPLAYNRDL 331          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_CLAM3 (Argininosuccinate lyase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=argH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 68/219 (31.05%), Postives = 100/219 (45.66%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATR----VPGLVATMFSAMPQEHERSL 741
            GR ++D +AT + + LR    +I   L +  D LAAQA+  G   + GRT LQHA PV L   +      + R  +RL++   R  V  +G  +   + LG  A  VA+ L    +           RD + EFA VL  +   L +L  +I +L  T        S     GSS MP K+NP  A +    + R    + GL+AT+   +P  + R L
Sbjct:  120 GRSRNDQIATLVRMYLRDHAAVIHAMLVQLVDALAAQAEAAGGAIMPGRTHLQHAQPVLLAHHLLAHCWPLVRDLERLADWDARADVSPYGSGALAGSTLGLDAGAVARDLGF-ARSSENSIDGTAARDVVAEFAFVLAQVGIDLSRLSEEI-ILWNTREFGFVTLSDSFSTGSSIMPQKKNPDIAELARGKSGRLIGNLSGLLATL-KGLPLAYNRDL 335          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_ROSS1 (Argininosuccinate lyase OS=Roseiflexus sp. (strain RS-1) GN=argH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.608e-12
Identity = 68/221 (30.77%), Postives = 94/221 (42.53%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQ---PWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPG---LVATMFSAMPQEHERSL 741
            GR ++D +AT + L    A   I+  L      L AQA+  G   + G T LQ A PV L   +      + R R+RL++   R   L  G  SG +A  G   M    ALA EL +           + RD + EF     LI   L +L  D+ +    E   V    A    GSS MP K+NP    +L   A R+ G    V TM   +P  +++ L
Sbjct:  103 GRSRNDQVATDVRLWTLGAIRRIDDRLRALQTALLAQAETAGAALMPGYTHLQRAQPVLLAHWLLAHFWPLQRDRERLADCAKRTATLPLG--SGAIA--GTPLMVDRTALAVELGMTAVSPNSIDAVSDRDFIAEFLFCAALIGTHLSRLAEDMIIYSSAEFGFVTLADAYST-GSSLMPQKKNPDSFELLRGKAGRLTGDLIAVLTMLKGLPSAYDKDL 318          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_METTH (Argininosuccinate lyase OS=Methanobacterium thermoautotrophicum GN=argH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 68/252 (26.98%), Postives = 114/252 (45.24%), Query Frame = -3
Query:   34 MAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQ-----RDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVAT---MFSAMPQEHERSL-----GLWHAEWETLPEICRLVSGAL 750
            M  G+ ++D +AT L L LR     I  +L  + D ++  A  +  T + G T LQHA P TLG  +  +  ++ R  +RL +   R+     G      AA+   + P+ + L   L LG  +   ++      RD + E    L ++A +L ++  ++ +L  T    + E        SS MP K+NP  A +  +  + V G + T   +  A+P  + R L      LW A  +T+  + R+V G L
Sbjct:  101 MHTGKSRNDQVATDLRLALRERIRTISRELLDFIDSISDLALDHTETVMVGYTHLQHAQPTTLGHHLMAYASSLRRDYERLQDTLKRVDQNPLGS-----AAMTTTSFPINRELTTRL-LGFSDYMKNSMDAVSARDFIAETVFDLSMLAVNLSRISEEM-ILWSTHEFGIVEIPDEFSSTSSIMPQKKNPDVAEIARAKTSTVQGELVTILGIMKALPYTYNRDLQEVTPHLWRAV-DTVLSMIRVVRGML 344          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_THEPX (Argininosuccinate lyase OS=Thermoanaerobacter sp. (strain X514) GN=argH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 56/207 (27.05%), Postives = 91/207 (43.96%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT   L LR   + I+ DL +  D L   A+ Y    + G T LQ A PVT G  +  ++    R   RL ++  R+ V+  G  +            VA  L  +  + +      + RD ++EF S   +    L +   ++ +L  T+  +  E       GSS MP K+NP  A ++     RV G + T+ + M
Sbjct:  102 GRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTLKEMAETYKKAIMPGYTHLQRAQPVTFGHHLLAYVEMFKRDLSRLEDMYKRVNVMPLGSGALAGTTFDIDRKYVASLLGFD-DITLNSMDGVSDRDFVIEFLSFASITMMHLSRFCEEL-ILWSTKEFDFIEMDDRFSTGSSMMPQKKNPDAAELIRGKTGRVYGDLITILTVM 306          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_THEP3 (Argininosuccinate lyase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=argH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 56/207 (27.05%), Postives = 91/207 (43.96%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT   L LR   + I+ DL +  D L   A+ Y    + G T LQ A PVT G  +  ++    R   RL ++  R+ V+  G  +            VA  L  +  + +      + RD ++EF S   +    L +   ++ +L  T+  +  E       GSS MP K+NP  A ++     RV G + T+ + M
Sbjct:  102 GRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTLKEMAETYKKAIMPGYTHLQRAQPVTFGHHLLAYVEMFKRDLSRLEDMYKRVNVMPLGSGALAGTTFDIDRKYVASLLGFD-DITLNSMDGVSDRDFVIEFLSFASITMMHLSRFCEEL-ILWSTKEFDFIEMDDRFSTGSSMMPQKKNPDAAELIRGKTGRVYGDLITILTVM 306          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY2_CHICK (Argininosuccinate lyase OS=Gallus gallus GN=ASL2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 72/257 (28.02%), Postives = 114/257 (44.36%), Query Frame = -3
Query:    1 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ---LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVAT---MFSAMPQEHERSL----GLWHAEWETLPEICRLVSGALHQAQLVSEGLE 741
            GR ++D + T L L L+S+  +I   L +    L  +A       + G T LQ A P+     +     A+ R  +RL E+K R+ VL  G  SG LA  G       + L +EL    + +      ++RD +VE  SV  L+   L KL  D+ +   TE   V    A   G SS +P K+NP    ++ S A RV G +A    +   +P  + + L           +TL  + ++ +G +   Q+  E +E
Sbjct:  110 GRSRNDQVVTDLKLLLKSSISVISTHLLQLIKTLVERAATEIDVIMPGYTHLQKALPIRWSQFLLSHAVALIRDSERLGEVKKRMSVLPLG--SGALA--GNPLEIDRELLRSELDFASISLNSMDAISERDFVVELLSVATLLMIHLSKLAEDLIIFSTTEFGFVTLSDAYSTG-SSLLPQKKNPDSLELIRSKAGRVFGRLAAVLMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQVNKENME 361          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAHJ (Fumarate hydratase class II OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fumC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 66/213 (30.99%), Postives = 95/213 (44.60%), Query Frame = -3
Query:  115 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGV--PEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQ 729
            +D   T + + L    E  +E  L    D    +  +Y +    GRT LQ ATP+ LG +I+GW   + +  + L+E K  +L L  GG A GT + A  E    VA+ ++          E  +H  T  D +V+    L  +A  L K+  DI  L     A + E S P  + GSS MP K NP    +L   A +V G   T+  A  Q
Sbjct:  139 NDTFPTAMHVALYHEVETKLEPALKHLRDTFKEKEDKYQSIIKIGRTHLQDATPIKLGQEISGWRYMLDKCEELLAESKKHILSLAIGGTAVGTGINAHPEFGNKVAKFISENTGYNFVSSENKFHALTSHDEVVQLHGTLKALAADLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTTVGIASSQ 351          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAC (Fumarate hydratase class II OS=Staphylococcus aureus (strain COL) GN=fumC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VA  ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAHYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ARLY_SYNPX2.763e-1228.13Argininosuccinate lyase OS=Synechococcus sp. (stra... [more]
ARLY_LEIXX2.763e-1230.00Argininosuccinate lyase OS=Leifsonia xyli subsp. x... [more]
ARLY_CLAM32.763e-1231.05Argininosuccinate lyase OS=Clavibacter michiganens... [more]
ARLY_ROSS13.608e-1230.77Argininosuccinate lyase OS=Roseiflexus sp. (strain... [more]
ARLY_METTH4.712e-1226.98Argininosuccinate lyase OS=Methanobacterium thermo... [more]
ARLY_THEPX6.155e-1227.05Argininosuccinate lyase OS=Thermoanaerobacter sp. ... [more]
ARLY_THEP36.155e-1227.05Argininosuccinate lyase OS=Thermoanaerobacter pseu... [more]
ARLY2_CHICK6.155e-1228.02Argininosuccinate lyase OS=Gallus gallus GN=ASL2 P... [more]
FUMC_STAHJ8.038e-1230.99Fumarate hydratase class II OS=Staphylococcus haem... [more]
FUMC_STAAC8.038e-1232.35Fumarate hydratase class II OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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