EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_PSYA2 (Argininosuccinate lyase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=argH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 61/214 (28.50%), Postives = 98/214 (45.79%), Query Frame = -3
Query:  112 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ--LGVPEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQE 741
            GR ++D +AT + L LR   + I   L R    L   A+++  T + G T LQ A PV+ G  +  W   + R  +RL + + R+  +  G A     AL     P+ + + AEL    G+ +      + RD  +EF S   ++   + ++  +I L M  +   V  P     G SS MP K+NP    ++   A RV G + T+ S M  +
Sbjct:  103 GRSRNDQVATDIRLWLREETDNIIALLVRLQSGLLDLAEQHTDTIMPGFTHLQTAQPVSFGHHVMAWFEMLYRDTERLVDARRRINQMPLGSA-----ALAGTTFPIDRTITAELLGFEGICQNSLDAVSDRDFAIEFTSAASILMMHMSRMSEEIILWMSAQFNFVQIPDRFCTG-SSIMPQKKNPDVPELVRGKAARVFGQLMTLLSLMKSQ 310          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_PSESM (Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato GN=argH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 59/211 (27.96%), Postives = 94/211 (44.55%), Query Frame = -3
Query:  121 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQ----LGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 741
            GR ++D +AT + L LR   +LI  ++ R    L  QA+R   T + G T LQ A PVT G  +  W   ++R  +RL + + RL  +  G A     AL     P+ + L  +L     +G       + RD  +EF S   +    L +   ++ L    +   +  P     G SS MP K+NP    ++   + RV G +  + + M
Sbjct:  111 GRSRNDQVATDIRLWLRDEIDLILSEITRLQKGLLVQAERESDTIMPGFTHLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRLNRMPLGSA-----ALAGTTYPIDRELTCKLLGFDVVGGNSLDGVSDRDFAIEFCSAASIAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTG-SSIMPQKKNPDVPELVRGKSGRVFGALMGLLTLM 315          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_GLUDA (Argininosuccinate lyase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=argH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 60/211 (28.44%), Postives = 98/211 (46.45%), Query Frame = -3
Query:  121 RYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHT-----QRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAM 738
            R ++D +AT   L +R A + ++   A     L  +A+++   P+ G T LQ A PVT G  +  ++  + R R RL++ + RL     G A     AL   + P+ + + A   LG      ++      RD  +E+ S L ++A  L +L  +I +      A V   S     GSS MP KRNP  A ++ +   RV G +  + + M
Sbjct:  122 RSRNDQVATDFRLWVRDAIDGLDAQAASLMRALCRRAEQHAADPMPGFTHLQTAQPVTFGHHLMAYVEMLGRDRGRLADARRRLNECPLGSA-----ALAGTSFPIDRRMTAAA-LGFDRPTANSLDAVSDRDFALEYLSALSIMAMHLSRLSEEIVIWCSAPFAFV-RLSDAFTTGSSIMPQKRNPDAAELVRAKIGRVTGALVGLLTVM 325          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_FRASC (Argininosuccinate lyase OS=Frankia sp. (strain CcI3) GN=argH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 68/223 (30.49%), Postives = 98/223 (43.95%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPV-AQALAAELQLG---VPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATR----VPGLVATMFSAMPQEHERSL 741
            GR ++D +AT L L LR +   +   L      L   A+++  TP  G T LQHA P++ G ++   + A  R   RL +   R  V   G       AL   ++P+  Q +AAEL             + RD   EF  V  LI   L +LG +I L    E   V E       GSS MP K+NP  A +    + R    + G +AT+   +P  ++R L
Sbjct:  105 GRSRNDQVATDLRLYLRDSAREVAARLTELSHALVVLAEQHVDTPAPGMTHLQHAQPISFGHQLLAHVQAFVRDIDRLRDWDVRASVSALGAG-----ALAGSSLPLDPQGVAAELGFDRAFANSLDAVSDRDFAAEFLFVAALIGVHLSRLGEEIVLWTTREFGWV-ELDDAFATGSSIMPQKKNPDVAELARGKSGRLIGDLTGFLATL-KGLPLAYDRDL 320          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAS1 (Fumarate hydratase class II OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=fumC PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L +  E  +E  L    D    + ++Y      GRT LQ ATP+ LG +I+GW   + +    LSE K  +L L  GG A GT + A  E    VA+ +A     G P    E  +H  T  D +V+    L  +A  L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYNEVETKLEPALKTLRDTFKQKEEQYHDIIKIGRTHLQDATPIRLGQEISGWRYMLDKCETLLSESKAHILNLAIGGTAVGTGINAHPEFGDKVAKFIAE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALATDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAES (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fumC PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 60/169 (35.50%), Postives = 80/169 (47.34%), Query Frame = -3
Query:  115 GRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGV--PEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQ 600
            GRT LQ ATP+ LG +I+GW   + +  Q LSE K  +L L  GG A GT + A  E    VA+ ++          E  +H  T  D +V+    L  +A  L K+  DI  L     A + E S P  + GSS MP K NP    +L   A +V G   T+  A  Q
Sbjct:  183 GRTHLQDATPIKLGQEISGWRYMLEKCEQLLSESKKHILNLAIGGTAVGTGINAHPEFGHKVAKYISQNTGYAFVSSENKFHALTSHDEIVQLHGTLKALATDLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTTVGIASSQ 351          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 60/169 (35.50%), Postives = 80/169 (47.34%), Query Frame = -3
Query:  115 GRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGV--PEQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQ 600
            GRT LQ ATP+ LG +I+GW   + +  Q LSE K  +L L  GG A GT + A  E    VA+ ++          E  +H  T  D +V+    L  +A  L K+  DI  L     A + E S P  + GSS MP K NP    +L   A +V G   T+  A  Q
Sbjct:  183 GRTHLQDATPIKLGQEISGWRYMLEKCEQLLSESKKHILNLAIGGTAVGTGINAHPEFGHKVAKYISQNTGYAFVSSENKFHALTSHDEIVQLHGTLKALATDLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTTVGIASSQ 351          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAN (Fumarate hydratase class II OS=Staphylococcus aureus (strain N315) GN=fumC PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VA  ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFESIIKIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAHYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: FUMC_STAAM (Fumarate hydratase class II OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fumC PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  148 SDVMATGLVLQLRSAFEL-IEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGG-ASGT-LAALGEQAMPVAQALAAELQLGVP----EQPWH--TQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAP-GKGGSSTMPHKRNPVGAAVLISAATRVPG 729
            +D   T + + L    E  +E  L    + L  +  ++ +    GRT LQ ATP+ LG +I+GW   + R    LSE K  +L L  GG A GT + A  E    VA  ++     G P    E  +H  T  D +V+    L  +AG L K+  D+  L     A + E S P  + GSS MP K NP    +L   A +V G
Sbjct:  139 NDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFESIIKIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAHYISE--NTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMG 340          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: ARLY_ROSCS (Argininosuccinate lyase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=argH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 62/220 (28.18%), Postives = 94/220 (42.73%), Query Frame = -3
Query:   97 GRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGAS--GTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPG---LVATMFSAMPQEHERSL 741
            GR ++D +AT + L    A + I+  +      L  QA+  G   + G T LQ A PV L   +     +  R R+RL++   R  VL  G  +  GT  A+   A+     +AA     +      + RD + EF     LI   L +L  D+ +    E   V    A   G SS MP K+NP    +L   A R+ G    V T+   +P  +++ L
Sbjct:  103 GRSRNDQVATDVRLWTMGAIQRIDDGVRALQQALLTQAEAAGDALMPGYTHLQRAQPVLLAHWLLSHFWSAQRDRERLTDCAKRTSVLPLGSGAIAGTPLAIDRAALAADLGMAAISPNSIDAV---SDRDFVAEFLFCAALIGIHLSRLAEDMIIYSSAEFGFVVLADAYSTG-SSLMPQKKNPDSFELLRGKAGRLTGDLVTVLTVLKGIPSAYDKDL 318          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ARLY_PSYA21.371e-1128.50Argininosuccinate lyase OS=Psychrobacter arcticus ... [more]
ARLY_PSESM1.371e-1127.96Argininosuccinate lyase OS=Pseudomonas syringae pv... [more]
ARLY_GLUDA1.371e-1128.44Argininosuccinate lyase OS=Gluconacetobacter diazo... [more]
ARLY_FRASC1.371e-1130.49Argininosuccinate lyase OS=Frankia sp. (strain CcI... [more]
FUMC_STAS11.791e-1132.35Fumarate hydratase class II OS=Staphylococcus sapr... [more]
FUMC_STAES1.791e-1135.50Fumarate hydratase class II OS=Staphylococcus epid... [more]
FUMC_STAEQ1.791e-1135.50Fumarate hydratase class II OS=Staphylococcus epid... [more]
FUMC_STAAN1.791e-1132.35Fumarate hydratase class II OS=Staphylococcus aure... [more]
FUMC_STAAM1.791e-1132.35Fumarate hydratase class II OS=Staphylococcus aure... [more]
ARLY_ROSCS1.791e-1128.18Argininosuccinate lyase OS=Roseiflexus castenholzi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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