EY684545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB8_RAT (ATP-binding cassette sub-family B member 8, mitochondrial OS=Rattus norvegicus GN=Abcb8 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 7.245e-49 Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = 3 Query: 9 TRPIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK-IGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 T + G+ ALVG SG GK++V +L+ERFYDPTAG V +DG D+R L+ LR + IG + QEP LFA +I +NI +GK H F+S+ P+ Y T VGERG LSGGQKQR+AIARA++K P +L+LDEATSALDAESE ++QEAL+R GRT +++AHRLST+R I V+ +G++ E G Sbjct: 476 TLKLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKRPTVLILDEATSALDAESERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAG 673
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCBB_RABIT (Bile salt export pump OS=Oryctolagus cuniculus GN=ABCB11 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.462e-49 Identity = 103/192 (53.65%), Postives = 132/192 (68.75%), Query Frame = 3 Query: 30 QSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGK--EGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 Q+ A VG+SG GKS+ I L+ERFYDP GKVMIDG D R++N++ LR IG+V QEP LFA SI DNI YG + H FV +LP Y+T VG +G QLS G+KQRIAIARA++++P ILLLDEATSALD ESE +Q AL++ GRT +++AHRLSTI+ D I V+ G ++E+G Sbjct: 1107 QTLAFVGSSGCGKSTSIQLLERFYDPDHGKVMIDGHDSRKVNIQFLRSNIGIVSQEPVLFACSIKDNIKYGDNTQEIPMERIIAAAKKAQVHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQVALDKAREGRTCIVIAHRLSTIQNSDIIAVMSQGMVIEKG 1298 HSP 2 Score: 179.104 bits (453), Expect = 3.150e-44 Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 I+ G+ ALVG SG+GKS+ + LI RFY PT G V ++ DIR +++ LR +IG+V+QEP LF +I + I YG+E + F+ LP + T VGE G Q+SGGQKQR+AIARA+++NP ILLLD ATSALD ESE ++QEAL + G T V VAHR +TIR D I +HG VE+G Sbjct: 445 IKPGEMTALVGPSGAGKSTALQLIHRFYGPTEGMVTVESHDIRSSHIQWLRNQIGIVEQEPVLFFHTIAEKIRYGREDATMEDLIQAAKEANAYNFIMDLPQQFDTLVGEGGGQMSGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEALSKTQHGHTIVSVAHRPATIRTADVIIGCEHGAAVERG 638
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.462e-49 Identity = 103/209 (49.28%), Postives = 134/209 (64.11%), Query Frame = 3 Query: 6 PTRP-----------IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 PTRP + G ALVG SG GKS+VIA+IERFYDP +G + DG DI+ L+ R IG V QEP LFA SI DNI +G + H F+ N Y T VGERGV+LSGGQKQR+AIARA+++NP ILLLDEATSALDAESE ++++A++ +M+ RT +++AHRLST+ + + V+ G+I E G Sbjct: 676 PTRPNNSVLKGLNLKLSKGTITALVGPSGGGKSTVIAMIERFYDPNSGSITFDGIDIKELDPVWYRGIIGYVSQEPVLFAGSIKDNITFGNDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSGGQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVINANTVVVINQGKIEEMG 884
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_SACD2 (Lipid A export ATP-binding/permease protein msbA OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=msbA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.236e-48 Identity = 105/194 (54.12%), Postives = 131/194 (67.53%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 I GQ+ ALVG+SGSGKS++++L+ RFYD G + IDG I+ L L +LR I LV Q+ LF +I NIAYG E H F+ ALPN Y+TP GE G +LSGGQ+QRIAIARA+ KN IL+LDEATSALD ESE +Q AL+ L +GRTT+++AHRLSTI D I V+ +GRIVE G Sbjct: 372 IEPGQTVALVGSSGSGKSTIVSLLLRFYDNQQGSITIDGTPIQSLELHNLREHIALVNQQTILFNDTIAANIAYGSEHIDEARIQDAAKQANAHDFIMALPNGYQTPAGEDGSRLSGGQRQRIAIARALYKNAPILILDEATSALDNESEKQIQSALDELKQGRTTLVIAHRLSTIENADTILVMDNGRIVEAG 565
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 2.108e-48 Identity = 100/194 (51.55%), Postives = 136/194 (70.10%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 + G++ ALVG SG GKS++++LI RFYD T+G+++IDG DIR +SLR ++G+V Q+ LF+ +I +NIA GK H F+ + P Y+T VGERGV+LSGGQKQRI+IAR LKNP +L+LDEATSALD ESE +QEA+++L + RTT +VAHRLSTI D I V+++G I+E G Sbjct: 365 VNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIG 558
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: HEPA_ANASP (Heterocyst differentiation ATP-binding protein hepA OS=Anabaena sp. (strain PCC 7120) GN=hepA PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 2.108e-48 Identity = 98/197 (49.75%), Postives = 137/197 (69.54%), Query Frame = 3 Query: 9 TRPIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 T I G++ ALVGASG+GK+++ LI RFYDPT G++++DG D++ + SLR K+ +V Q+ +F SI DNIAYG G F+ +P + T +G+RGV+LSGGQ+QRIAIARA+L++P IL+LDEATSALD+ SE ++QE++E+L GRT + +AHRLSTI D + V++ GRIVEQG Sbjct: 384 TLTIERGKTTALVGASGAGKTTLADLIPRFYDPTEGQILVDGLDVQYFEINSLRRKMAVVSQDTFIFNTSIRDNIAYGTSGASEAEIREVARLANALQFIEEMPEGFDTKLGDRGVRLSGGQRQRIAIARALLRDPEILILDEATSALDSVSERLIQESIEKLSVGRTVIAIAHRLSTIAKADKVVVMEQGRIVEQG 580
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPA (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Paris) GN=msbA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.696e-48 Identity = 103/194 (53.09%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 I AG S ALVG SGSGK+++ +L+ RFY+ + G + +DG I++L+L+SLR +I LV Q LF ++ +NIAYG+ F+ LP+ Y T VGE GV LSGGQ+QRIAIARA+LK+ IL+LDEATSALD+ESE +Q ALE++M+GRTT+++AHRLSTI+ I V+QHGRIVEQG Sbjct: 365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQISLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQG 558
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MDR3_CAEEL (Multidrug resistance protein 3 OS=Caenorhabditis elegans GN=pgp-3 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 8.010e-48 Identity = 103/191 (53.93%), Postives = 129/191 (67.54%), Query Frame = 3 Query: 27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 GQ+ ALVG SG GKS+ I LIER+YD G V ID DIR L++K LR I LV QEP LF +I +NI YG E H FV LP+ Y T VG G +LSGGQKQR+AIARA++++P ILLLDEATSALD ESE ++QEAL++ GRT V++AHRLSTI+ D I V ++G+ +E+G Sbjct: 1057 GQTVALVGPSGCGKSTTIQLIERYYDALCGSVKIDDSDIRDLSVKHLRDNIALVGQEPTLFNLTIRENITYGLENITQDQVEKAATLANIHTFVMGLPDGYDTSVGASGGRLSGGQKQRVAIARAIVRDPKILLLDEATSALDTESEKIVQEALDKARLGRTCVVIAHRLSTIQNADKIIVCRNGKAIEEG 1247 HSP 2 Score: 173.326 bits (438), Expect = 1.728e-42 Identity = 97/209 (46.41%), Postives = 127/209 (60.77%), Query Frame = 3 Query: 6 PTRP-----------IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 PTRP + G++ ALVG SG GKS+ I L+ RFY+ AG + +DG I+ N++ LR IG+VQQEP +F A++ +NI G H F+ L + Y T +G VQLSGGQKQR+AIARA+++ P ILLLDEATSALD ESE ++Q AL++ GRTT+ +AHRLSTIR I V G I E+G Sbjct: 386 PTRPELKILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGIPIQEYNIRWLRSTIGIVQQEPIIFVATVAENIRMGDVLITDQDIEEACKMANAHEFICKLSDRYDTVIGAGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGLIAERG 594
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 1.046e-47 Identity = 102/194 (52.58%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 I AG S ALVG SGSGK+++ +L+ RFY+ + G + +DG I++L+L+SLR ++ LV Q LF ++ +NIAYG+ F+ LP+ Y T VGE GV LSGGQ+QRIAIARA+LK+ IL+LDEATSALD+ESE +Q ALE++M+GRTT+++AHRLSTI+ I V+QHGRIVEQG Sbjct: 365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQG 558
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y4GM_RHISN (Uncharacterized ABC transporter ATP-binding protein y4gM OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.366e-47 Identity = 97/192 (50.52%), Postives = 132/192 (68.75%), Query Frame = 3 Query: 24 AGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 AG++ ALVG SG+GKSS+I LI R YDP G V +DG D++ + +SLR +IG V Q+ LF+ +I NI+ G+EG H F+ +P+ Y T VGE G++LSGGQKQRI IARA+L+N IL+ DEATSALD+ESE +++AL RL R RTT+++AHRLST+ D I V++ G++ EQG Sbjct: 371 AGKTTALVGPSGAGKSSIINLIMRLYDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREGASDEEIIEAAKTANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDEATSALDSESEIQIRQALARLTRKRTTIMIAHRLSTVTAADNIVVMEGGQVAEQG 562 The following BLAST results are available for this feature:
BLAST of EY684545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684545 ID=EY684545; Name=EY684545; organism=Citrus sinensis; type=EST; length=932bpback to top |