EY684545

Overview
NameEY684545
Unique NameEY684545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPL (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Lens) GN=msbA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.784e-47
Identity = 102/194 (52.58%), Postives = 136/194 (70.10%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I AG S ALVG SGSGK+++ +L+ RFY+ + G + +DG  I++L+L+SLR ++ LV Q   LF  ++ +NIAYG+                   F+  LP+ Y T VGE GV LSGGQ+QRIAIARA+LK+  IL+LDEATSALD+ESE  +Q ALE++M GRTT+++AHRLSTI+    I V+QHGRIVEQG
Sbjct:  365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMNGRTTLIIAHRLSTIKHAHKIIVMQHGRIVEQG 558          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCBB_MOUSE (Bile salt export pump OS=Mus musculus GN=Abcb11 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.784e-47
Identity = 98/194 (50.52%), Postives = 131/194 (67.53%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I+ G++ A VG+SG+GKS+ + LI+RFYDP  G V +DG DIR LN++ LR +IG+V+QEP LF+ +I +NI  G+E                + F+ ALP  + T VGE G Q+SGGQKQR+AIARA+++ P ILLLD ATSALD ESE  +Q AL ++  G T + VAHRLST+R  D I   +HG  VE+G
Sbjct:  445 IKPGETTAFVGSSGAGKSTALQLIQRFYDPCEGMVTLDGHDIRSLNIRWLRDQIGIVEQEPVLFSTTIAENIRLGREEATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGGGQMSGGQKQRVAIARALIRKPKILLLDMATSALDNESEAKVQGALNKIQHGHTIISVAHRLSTVRSADVIIGFEHGTAVERG 638          

HSP 2 Score: 189.119 bits (479), Expect = 3.044e-47
Identity = 101/193 (52.33%), Postives = 131/193 (67.88%), Query Frame = 3
Query:   27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGK--EGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            GQ+ A VG+SG GKS+ I L+ERFYDP  G VMIDG D +++N++ LR  IG+V QEP LF  SI DNI YG   +                H FV +LP  Y+T VG +G QLS G+KQRIAIARA++++P ILLLDEATSALD ESE  +Q AL++   GRT +++AHRLSTI+  D I V+  G ++E+G
Sbjct: 1106 GQTLAFVGSSGCGKSTSIQLLERFYDPDQGTVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFDCSIMDNIKYGDNTKEISVERAIAAAKQAQLHDFVMSLPEKYETNVGIQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQLALDKAREGRTCIVIAHRLSTIQNSDIIAVMSQGVVIEKG 1298          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y2003_STAA8 (Putative multidrug export ATP-binding/permease protein SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02003 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1956_STAAR (Putative multidrug export ATP-binding/permease protein SAR1956 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1924_STAAC (Putative multidrug export ATP-binding/permease protein SACOL1924 OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1866_STAAM (Putative multidrug export ATP-binding/permease protein SAV1866 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1866 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1847_STAA3 (Putative multidrug export ATP-binding/permease protein SAUSA300_1847 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1847 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1806_STAAW (Putative multidrug export ATP-binding/permease protein MW1806 OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1799_STAAB (Putative multidrug export ATP-binding/permease protein SAB1799c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1799c PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: Y1788_STAAS (Putative multidrug export ATP-binding/permease protein SAS1788 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.192e-47
Identity = 101/194 (52.06%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I  G++ A VG SG GKS++I LI RFYD T+G+++IDG +I+     SLR +IGLVQQ+  LF+ ++ +NI  G+                 H F+  LP  Y T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++QEAL+ L + RTT++VAHRLSTI   D I V+++G IVE G
Sbjct:  364 IEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557          
The following BLAST results are available for this feature:
BLAST of EY684545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSBA_LEGPL1.784e-4752.58Lipid A export ATP-binding/permease protein msbA O... [more]
ABCBB_MOUSE1.784e-4750.52Bile salt export pump OS=Mus musculus GN=Abcb11 PE... [more]
Y2003_STAA85.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1956_STAAR5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1924_STAAC5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1866_STAAM5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1847_STAA35.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1806_STAAW5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1799_STAAB5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]
Y1788_STAAS5.192e-4752.06Putative multidrug export ATP-binding/permease pro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684545 ID=EY684545; Name=EY684545; organism=Citrus sinensis; type=EST; length=932bp
TCCGACCCACGCGTCCGATCCGTGCTGGCCAGAGCCAAGCTCTTGTAGGT
GCTAGTGGGTCTGGCAAGAGTTCTGTGATTGCATTGATTGAGAGATTTTA
CGATCCTACAGCTGGGAAAGTTATGATTGATGGCAAGGATATTCGTCGAT
TGAACTTGAAGTCCCTTAGGCTTAAAATTGGTTTGGTGCAACAAGAGCCA
GCCCTGTTTGCGGCGAGCATTTTTGATAACATTGCATATGGAAAAGAAGG
TGCAACTGAAGCAGAAGTCGTTGAGGCCGCCCGTGCTGCTAATGTGCATG
GGTTTGTTAGTGCATTGCCCAATGCGTACAAAACACCAGTTGGTGAGAGA
GGGGTTCAACTCTCTGGTGGACAGAAGCAAAGGATAGCAATTGCTAGGGC
TGTTCTCAAGAACCCAGCAATACTTCTGCTTGATGAGGCCACAAGTGCCC
TTGATGCTGAATCTGAGTGTGTGCTACAAGAAGCTCTTGAGAGGCTAATG
AGGGGCCGAACCACGGTTCTTGTGGCTCACCGATTATCAACAATAAGAGG
TGTAGACTGCATTGGAGTTGTGCAACATGGCCGCATTGTAGAACAAGGTT
AGCCCCTCCGAATGGGGTAGGCGTCCGGATGGGGCATATTCTAGACTTTT
TGCATTAGAGCATCATCCTATTTGGAGGTGGCTTTTGGCCTTGACGGGGA
TAGTTTGTTTGGGTCCGCCTGTAACCGGCTGTTCCGCCTGTTCTTTTAGG
ATGAGCAATGCAACCGCGCGGAGCGGGCGAGGCGGGAGTGTGGGCGGAGG
ACAAGCGGCCCAGTGGGCGGTGAGGCTGCTGGGGGCGTGCGGCAGCGCGC
CGGGGCAGGGCGCCCGCGGCCTATGCACGTGGTGGCCTACTGGCCGATGG
GTGTGTTGGCGTGGGCGCGGCAACCCTCTCCT
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