EY684545

Overview
NameEY684545
Unique NameEY684545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: YWJA_BACSU (Uncharacterized ABC transporter ATP-binding protein ywjA OS=Bacillus subtilis GN=ywjA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.721e-45
Identity = 95/194 (48.97%), Postives = 134/194 (69.07%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            I+AG++ A VG SG+GKS++ +L+ RFY+ + G + IDG  I+ + L SLR +IG+VQQ+  LF+ ++ +NIAYG+ G                  V  +P+   T +GERGV+LSGGQKQR++IAR  LKNP+IL+LDEATSALD E+E  +Q+AL+ L  GRTT+++AHRL+TI+  D I VV +  I EQG
Sbjct:  356 IQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQG 549          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MDR1_LEIEN (Multidrug resistance protein 1 OS=Leishmania enriettii GN=MDR1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.860e-45
Identity = 107/216 (49.54%), Postives = 134/216 (62.04%), Query Frame = 3
Query:    6 PTRP-----------IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQH-----GRIVEQG 599
            PTRP           I+ GQ  A  GASG GKSSVI LI+RFYDP  G V++DG  +R L L+  R +IG+V QEP LFA ++ +N+  GK                 H  + ALP+ Y TPVG  G  LSGGQKQRIAIARA++K P ILLLDEATSALD +SE  +Q AL++L++  G T V++AHRL+TIR +D I  V+H      RI E G
Sbjct:  401 PTRPGMILFRDLSLKIKCGQKVAFSGASGCGKSSVIGLIQRFYDPIGGAVLVDGVRMRELCLREWRDQIGIVSQEPNLFAGTMMENVRMGKPNATDEEVVEACRQANIHDTIMALPDRYDTPVGPVGSLLSGGQKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQAALDQLIQRGGTTVVVIAHRLATIRDMDRIYYVKHDGAEGSRITESG 616          

HSP 2 Score: 149.828 bits (377), Expect = 2.046e-35
Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 3
Query:   33 SQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGR--TTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            S  L+G +G GKS+VI ++ RFY+  +G + ++G+D+  L++   R  I +V QEP LF+ ++ +NI Y +EG               H  +    + Y T VG +G  LSGGQKQRIAIAR +L+ P +LLLDEATSALD+ +E  +QE +E        TTV +AHRL+TIR  D I ++  G I+EQG
Sbjct: 1066 SNGLIGQTGCGKSTVIQMLARFYERRSGLISVNGRDLSSLDIAEWRRNISIVLQEPNLFSGTVRENIRYAREGATDEEVEEAARLAHIHHEIIKWTDGYDTEVGYKGRALSGGQKQRIAIARGLLRRPRLLLLDEATSALDSVTEAKVQEGIEAFQAKYKVTTVSIAHRLTTIRHCDQIILLDSGCIIEQG 1256          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: AB28B_ARATH (ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.860e-45
Identity = 93/196 (47.45%), Postives = 131/196 (66.84%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYG--KEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            + +G   ALVG+SG+GKS+++ L+ RFY+PT G++ + G+D+R  +       + +V QEP LF+ S+ +NIAYG   E                H F+ +LP  Y T VGERG  LSGGQ+QR+AIAR++LKN  IL+LDEATSALDA SE ++Q AL RLM+ RTT+++AHRLST++  + I V   G+I+E G
Sbjct:  495 LNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKVVSIVNQEPVLFSLSVAENIAYGLPNEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLMKDRTTLVIAHRLSTVQSANQIAVCSDGKIIELG 690          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_AZOSE (Lipid A export ATP-binding/permease protein msbA OS=Azoarcus sp. (strain EbN1) GN=msbA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.414e-44
Identity = 100/195 (51.28%), Postives = 127/195 (65.13%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGK-EGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            +  GQ  ALVG SGSGKS++  LI RFY    G+++IDG D+    LK+LR  I LV Q+  LF  ++ +NIAYG   G                 F+  LP  + T +GE GV LSGGQ+QR+AIARA+LKN  IL+LDEATSALD ESE  +Q AL R+M+ RTT+++AHRLSTI   D I V+ HGRIVE+G
Sbjct:  377 VEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERG 571          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.847e-44
Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 3
Query:   27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            G+  ALVG SGSGKSS + ++E FY    G+V++DGK I   + K L   I LV QEP LFA SI DNI+YG                  HGF+  L + Y T  GE+G QLSGGQKQR+A+ARA+++NP +L+LDEATSALDAESE ++Q+A+   ++  T +++AHRLST+     I V+  GR+V+QG
Sbjct:  532 GKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRVVQQG 722          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_PSYA2 (Lipid A export ATP-binding/permease protein msbA OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=msbA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.412e-44
Identity = 93/195 (47.69%), Postives = 133/195 (68.21%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXX-HGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            IRAG++ ALVG SG+GKSS++ L+ R    ++G++ +DG  I  + L+SLR +I +V Q+  LF  ++F+NIAYG                   H F+  +PN Y++ +G  G+QLSGGQ+QR++IARA+LK+  IL+LDEATSALD ESE  +Q+AL+ +MR RTT+++AHRL+TI   D I V+  GRIVE G
Sbjct:  380 IRAGETVALVGRSGAGKSSLVNLLTRTLSTSSGQITLDGMPIEDIKLESLRAQIAMVNQQVVLFNTTVFNNIAYGSLAHKTPAEVEQAAKDAFAHDFIMQMPNGYQSEIGAEGLQLSGGQRQRLSIARALLKDAPILILDEATSALDNESEYYIQKALDNIMRNRTTLVIAHRLTTIESADRIAVLDGGRIVELG 574          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.412e-44
Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 3
Query:   27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            G+  ALVG SGSGKSS + ++E FY    G+V++DGK I   + K L   I LV QEP LFA SI DNI+YG                  HGF+  L + Y T  GE+G QLSGGQKQR+A+ARA+++NP +L+LDEATSALDAESE ++Q+A+   ++  T +++AHRLST+     I V+  GR+V+QG
Sbjct:  528 GKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQG 718          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_NEIMA (Lipid A export ATP-binding/permease protein msbA OS=Neisseria meningitidis serogroup A GN=msbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.114e-44
Identity = 95/194 (48.97%), Postives = 125/194 (64.43%), Query Frame = 3
Query:   18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            IR G+  ALVG SGSGKS+V+ L+ RF +P+AG + IDG DI  + L  LR +  LV Q+  LF  ++F+N+ Y +                    + A P     P+G  G  LSGGQ+QR+AIARA+LK+  ILLLDEATSALD ESE ++Q+ALERLM  RT ++VAHRL+TI G D I V+  G+I+EQG
Sbjct:  400 IRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTIEGADRIIVMDDGKIIEQG 593          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: TAGA_DICDI (Serine protease/ABC transporter B family protein tagA OS=Dictyostelium discoideum GN=tagA PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.373e-44
Identity = 95/227 (41.85%), Postives = 139/227 (61.23%), Query Frame = 3
Query:   27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG*PLRMG*ASGWGIF*TFCIRASSYLEVAFGLDGDSL 707
            G   AL+G SG GKS++++LI R Y+   G + +DG +I+  N+ +L   I +V QEP+LF+ SI +NI +GK                 H F++A+P  Y T +GERG  LSGGQKQRIAIAR ++KNP +LLLDE TS LD ESE ++Q+++++L+ GRT ++VAHRL+TI   D I VV    I E G P  +   +  G+F         ++++ +G  G+ L
Sbjct: 1402 GTITALIGPSGGGKSTMLSLIGRLYNIDGGSITLDGTNIKDFNVPNLHEHISIVNQEPSLFSGSIAENIMFGKPTATRSEIIEACKQANAHDFITAMPEGYDTLIGERGTALSGGQKQRIAIARTIIKNPTVLLLDETTSELDVESEKLVQDSIDKLVVGRTVIIVAHRLTTILTADIIAVVSDSTISEMGTPEEL--LAKKGMF-------YDFVQIQYGKQGEEL 1619          
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: LMRA_LACLA (Multidrug resistance ABC transporter ATP-binding and permease protein OS=Lactococcus lactis subsp. lactis GN=lmrA PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.373e-44
Identity = 91/188 (48.40%), Postives = 130/188 (69.15%), Query Frame = 3
Query:   39 ALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXX-HGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599
            A  G SG GKS++ +L+ERFY PTAG++ IDG+ I  ++L++ R +IG V Q+ A+ A +I +N+ YG EG                  FV  +P+   T VGERGV++SGGQ+QR+AIARA L+NP IL+LDEAT++LD+ESE ++Q+AL+ LM+GRTT+++AHRLSTI   D I  ++ G+I   G
Sbjct:  379 AFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSG 566          
The following BLAST results are available for this feature:
BLAST of EY684545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YWJA_BACSU3.721e-4548.97Uncharacterized ABC transporter ATP-binding protei... [more]
MDR1_LEIEN4.860e-4549.54Multidrug resistance protein 1 OS=Leishmania enrie... [more]
AB28B_ARATH4.860e-4547.45ABC transporter B family member 28 OS=Arabidopsis ... [more]
MSBA_AZOSE1.414e-4451.28Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB9_HUMAN1.847e-4448.69ATP-binding cassette sub-family B member 9 OS=Homo... [more]
MSBA_PSYA22.412e-4447.69Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB9_MOUSE2.412e-4448.69ATP-binding cassette sub-family B member 9 OS=Mus ... [more]
MSBA_NEIMA4.114e-4448.97Lipid A export ATP-binding/permease protein msbA O... [more]
TAGA_DICDI5.373e-4441.85Serine protease/ABC transporter B family protein t... [more]
LMRA_LACLA5.373e-4448.40Multidrug resistance ABC transporter ATP-binding a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684545 ID=EY684545; Name=EY684545; organism=Citrus sinensis; type=EST; length=932bp
TCCGACCCACGCGTCCGATCCGTGCTGGCCAGAGCCAAGCTCTTGTAGGT
GCTAGTGGGTCTGGCAAGAGTTCTGTGATTGCATTGATTGAGAGATTTTA
CGATCCTACAGCTGGGAAAGTTATGATTGATGGCAAGGATATTCGTCGAT
TGAACTTGAAGTCCCTTAGGCTTAAAATTGGTTTGGTGCAACAAGAGCCA
GCCCTGTTTGCGGCGAGCATTTTTGATAACATTGCATATGGAAAAGAAGG
TGCAACTGAAGCAGAAGTCGTTGAGGCCGCCCGTGCTGCTAATGTGCATG
GGTTTGTTAGTGCATTGCCCAATGCGTACAAAACACCAGTTGGTGAGAGA
GGGGTTCAACTCTCTGGTGGACAGAAGCAAAGGATAGCAATTGCTAGGGC
TGTTCTCAAGAACCCAGCAATACTTCTGCTTGATGAGGCCACAAGTGCCC
TTGATGCTGAATCTGAGTGTGTGCTACAAGAAGCTCTTGAGAGGCTAATG
AGGGGCCGAACCACGGTTCTTGTGGCTCACCGATTATCAACAATAAGAGG
TGTAGACTGCATTGGAGTTGTGCAACATGGCCGCATTGTAGAACAAGGTT
AGCCCCTCCGAATGGGGTAGGCGTCCGGATGGGGCATATTCTAGACTTTT
TGCATTAGAGCATCATCCTATTTGGAGGTGGCTTTTGGCCTTGACGGGGA
TAGTTTGTTTGGGTCCGCCTGTAACCGGCTGTTCCGCCTGTTCTTTTAGG
ATGAGCAATGCAACCGCGCGGAGCGGGCGAGGCGGGAGTGTGGGCGGAGG
ACAAGCGGCCCAGTGGGCGGTGAGGCTGCTGGGGGCGTGCGGCAGCGCGC
CGGGGCAGGGCGCCCGCGGCCTATGCACGTGGTGGCCTACTGGCCGATGG
GTGTGTTGGCGTGGGCGCGGCAACCCTCTCCT
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