EY684545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 7.017e-44 Identity = 92/191 (48.17%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 27 GQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 G+ ALVG SGSGKSS + ++E FY G+V++DG+ I + K L I LV QEP LFA SI DNI+YG HGF+ L + Y T GE+G QLSGGQKQR+A+ARA+++NP +L+LDEATSALDAESE ++Q+A+ ++ T +++AHRLST+ I V+ GR+V+QG Sbjct: 528 GKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQG 718
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 7.017e-44 Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 + GQ+ ALVG SG+GKS+++ L+ RFYD ++G + IDG+DI ++ SLR IG+V Q+ LF +I DNI YG+ H + A P Y+T VGERG++LSGG+KQR+AIAR +LK P I+LLDEATSALD +E +Q +L ++ RTT++VAHRLST+ D I V++ G IVE+G Sbjct: 613 VMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERG 806
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_NEIMB (Lipid A export ATP-binding/permease protein msbA OS=Neisseria meningitidis serogroup B GN=msbA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 9.165e-44 Identity = 94/194 (48.45%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 IR G+ ALVG SGSGKS+V+ L+ RF +P+AG + IDG DI + L LR + LV Q+ LF ++F+N+ Y + + + P P+G G LSGGQ+QR+AIARA+LK+ ILLLDEATSALD ESE ++Q+ALERLM RT ++VAHRL+TI G D I V+ G+I+EQG Sbjct: 400 IRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTIEGADRIIVMDDGKIIEQG 593
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: AB25B_ARATH (ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABCB25 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 9.165e-44 Identity = 91/194 (46.91%), Postives = 130/194 (67.01%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 + AG+S A+VG SGSGKS+++ ++ RF+D +G + IDG+DI+ + L SLR IG+V Q+ LF +IF NI YG+ H +S P+ Y T VGERG++LSGG+KQR+A+AR LK+PAILL DEATSALD+ +E + AL+ L RT++ +AHRL+T D I V+++G++VEQG Sbjct: 502 VPAGKSVAIVGTSGSGKSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAARRAAIHETISNFPDKYSTIVGERGLKLSGGEKQRVALARTFLKSPAILLCDEATSALDSTTEAEILNALKALASNRTSIFIAHRLTTAMQCDEIVVLENGKVVEQG 695
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_PSYCK (Lipid A export ATP-binding/permease protein msbA OS=Psychrobacter cryohalolentis (strain K5) GN=msbA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.042e-43 Identity = 91/195 (46.67%), Postives = 133/195 (68.21%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXX-HGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 IRAG++ ALVG SG+GKSS++ L+ R ++G++ +DG I + L+SLR +I +V Q+ LF ++F+NIAYG H F+ +PN Y++ +G G+QLSGGQ+QR++IARA+LK+ IL+LDEATSALD ESE +Q+AL+ +M+ RTT+++AHRL+TI D I V+ G+IVE G Sbjct: 383 IRAGETVALVGRSGAGKSSLVNLLTRTLTTSSGQITLDGMPIEDIKLESLRAQIAMVNQQVVLFNTTVFNNIAYGSLAHKTPAEVEQAAKDAFAHDFIMQMPNGYQSEIGAEGLQLSGGQRQRLSIARALLKDAPILILDEATSALDNESEYYIQKALDNIMKNRTTLVIAHRLTTIESADRIAVLDGGQIVELG 577
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: NDVA_BARBK (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ndvA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.667e-43 Identity = 90/194 (46.39%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 ++AGQ+ A+VG +G+GK+++I L++R YDPT G + IDG +I +N +SLR + V Q+ LF +I DNI+ GK G H F+ Y T VGERG QLSGG++QR+AIARA+LKN IL+LDEATSALD E+E ++ A++ + + RTT ++AHRLSTIR D + + GR++E+G Sbjct: 358 VKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGYISIDGININSINRESLRKALATVFQDAGLFDRTIRDNISIGKTGATDEELYEATKTASAHDFILKKSKNYDTLVGERGSQLSGGERQRLAIARAILKNAPILILDEATSALDVETEIRVKNAIDCISQNRTTFIIAHRLSTIRNADLVLFLDQGRLIEKG 551
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: NDVA_BARBA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella bacilliformis GN=ndvA PE=3 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.667e-43 Identity = 90/194 (46.39%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 ++AGQ+ A+VG +G+GK+++I L++R YDPT G + IDG +I +N +SLR + V Q+ LF +I DNI+ GK G H F+ Y T VGERG QLSGG++QR+AIARA+LKN IL+LDEATSALD E+E ++ A++ + + RTT ++AHRLSTIR D + + GR++E+G Sbjct: 358 VKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGYISIDGININSINRESLRKALATVFQDAGLFDRTIRDNISIGKTGATDEELYEATKTASAHDFILKKSKNYDTLVGERGSQLSGGERQRLAIARAILKNAPILILDEATSALDVETEIRVKNAIDCISQNRTTFIIAHRLSTIRNADLVLFLDQGRLIEKG 551
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.667e-43 Identity = 91/194 (46.91%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 + AG+S A+VG+SGSGKS+++ +I RF+D +G V IDG+DI+ + L+SLR IG+V Q+ LF +IF NI YG H + P+ Y T VGERG+ LSGG+KQR+A+ARA LK+PAILL DEATSALD+++E + + L L RT + +AHRL+T D I V++ G++VE+G Sbjct: 462 VPAGKSVAIVGSSGSGKSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQDTVLFNDTIFHNIHYGNLSATEEEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASNRTCIFIAHRLTTAMQCDEILVMEKGKVVEKG 655
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: NDVA_RHIEC (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndvA PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.483e-43 Identity = 89/194 (45.88%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 ++AGQ+ A+VG +G+GK++++ L++R YDP G++++DG DI ++ KSLR I V Q+ L SI DNI G+EG F+ + Y T VGERG +LSGG++QRIAIARA+LK+ IL+LDEATSALD E+E ++ A++ L + RTT ++AHRLST+R D + + GR+VEQG Sbjct: 358 VKAGQTVAIVGPTGAGKTTLVNLLQRVYDPQGGQILVDGTDITKVTRKSLRRHIATVFQDAGLLNRSISDNIRLGREGASEEDMRRAAEAAAAADFIETREDRYDTHVGERGNKLSGGERQRIAIARAILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVREADMVLFLDDGRVVEQG 551
BLAST of EY684545 vs. ExPASy Swiss-Prot
Match: MSBA_NEIG1 (Lipid A export ATP-binding/permease protein msbA OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=msbA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.483e-43 Identity = 93/194 (47.94%), Postives = 124/194 (63.92%), Query Frame = 3 Query: 18 IRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGXXXXXXXXXXXXXXXHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQHGRIVEQG 599 IR G+ ALVG SGSGKS+V+ L+ RF +P+AG + IDG DI + L LR + LV Q+ LF ++F+N+ Y + + A P P+G G LSGGQ+QR+AIARA+LK+ ILLLDEATSALD ESE ++Q+ALERLM RT ++VAHRL+T+ D I V+ G+I+EQG Sbjct: 400 IRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTVESADRIIVMDGGKIIEQG 593 The following BLAST results are available for this feature:
BLAST of EY684545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684545 ID=EY684545; Name=EY684545; organism=Citrus sinensis; type=EST; length=932bpback to top |