EY684532

Overview
NameEY684532
Unique NameEY684532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684532 vs. ExPASy Swiss-Prot
Match: YBB2_SCHPO (Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12
Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 2 
Query:  131 TGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN---------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 475
            T A I+  V +H +A + +G  IGP+V++G    +E G R+    +     I  +A +  SI+  H  +G+W+RVE                      +T++G D  V DE+     +VLPHKEIK  ++  EIVM
Sbjct:  280 TEAEIIQPVFIHPNAIVSKGAKIGPNVSIGARVRIEDGARIRNSIIQEDCEISANAVVLHSILSRHCKIGKWSRVEGSPTLPSQHSTTIMRNSVKVQAITVMGADCIVHDEVRVQNCLVLPHKEIKVGLV-GEIVM 414
The following BLAST results are available for this feature:
BLAST of EY684532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
YBB2_SCHPO4.066e-1231.62Probable mannose-1-phosphate guanyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-B09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684532 ID=EY684532; Name=EY684532; organism=Citrus sinensis; type=EST; length=921bp
ATATAATAAAACGTAAGCCCTTTTTTNNNNTTTTTCTAAGGNNNCAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCGACCCACGCGTCCGCC
CTGAGGAAGTAATCCTCATTGAAGTTGGCCACTGGTGCTAACATTGTAGG
CAATGTCTTGGTGCATGAGAGTGCTCAAATTGGGGAGGGATGTTTGATTG
GACCCGATGTTGCCGTTGGCCCGGGTTGTGTTGTTGAGTCAGGAGTTAGA
CTCTCTCGCTGCACAGTGATGCGTGGAGTGCGCATCAAGAAACATGCTTG
CATATCCAGCAGTATCATTGGATGGCACTCCACTGTTGGGCAATGGGCTC
GTGTAGAGAACATGACCATTCTCGGGGAAGACGTTCATGTCTGCGATGAA
ATTTATAGCAATGGGGGTGTGGTTTTGCCGCACAAAGAGATAAAATCAAG
CATTTTGAAGCCAGAGATAGTCATGTGAGCCACTGATCAGATTGCAAGTA
GAGAATGTGGTCGGAGAGTAGCAAGTTATCCAGTCATTGTGCCCGGTAAT
GTGTTCTTTATCCTTTCTTCATCTTCTTTACAATTGTAAAACTCCGTGTG
TTTTAGTCTTTTGAGTCGTGTGAGTTCTAAAGTTGAAGGCTTTTTTACTT
TCTCTTGTACAATGCTCAAAATTATCATTGGTGTGCGAAGTGGAATTGTA
ACTTTAATGTAGATAAATATATGCAATATACCATCAAGTGGGTTCTGAGT
CACTATTGCCAATGATGTTCCCAAACCCGCATTCATTACCGACCAAGGAC
ACCTTTTCCCCACCACGAGAGAAAAGGGCGGGGGACGCCCCCAAAGACCG
GACCAAACTAGAATAGATAGTCTATTTCTACTCACTGCAAAATGGTACCA
AAGACATAATAATGACTGTCC
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