EY710093

Overview
NameEY710093
Unique NameEY710093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710093 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.407e-12
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  163 DAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG-HISGFFSQDNVKIADMIIKDQEFVEVTKEGLLPF 471
            D +YYG++ IG+P + F++ FDTGSS+LW+ S+ C    S    ++Y  + S TY   G    I YG G   SG  ++DNV +  ++IK Q  +E+ K     F
Sbjct:   82 DVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGS--RQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQT-IELAKREAASF 182          

HSP 2 Score: 23.483 bits (49), Expect = 4.407e-12
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query:  488 DGILGLGFQDIAAGNG--TPLWDNM 556
            DG+LGLGF  I    G  TP+ DN+
Sbjct:  188 DGLLGLGFDTITTVRGVKTPM-DNL 211          
BLAST of EY710093 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  139 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTY 327
            VV L N  D  Y+GEIGIG+PPQ F+V+FDTGSS LWVPSSK         HS Y +  S TY
Sbjct:    6 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKA--------HSMYESSDSSTY 60          
BLAST of EY710093 vs. ExPASy Swiss-Prot
Match: CARP1_RHINI (Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.741e-11
Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = 1
Query:  163 DAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG-HISGFFSQDNVKIADMIIKDQEFVEVTK 453
            D +YYGE+ +G+P     + FDTGSS++W  S+ C  S     H++Y  + S TY   G    I YG G   SG  + DNV +  ++IK Q  +E+ K
Sbjct:   79 DVEYYGEVTVGTPGIKLKLDFDTGSSDMWFASTLC--SSCSNSHTKYDPKKSSTYAADGRTWSISYGDGSSASGILATDNVNLGGLLIKKQT-IELAK 173          

HSP 2 Score: 23.0978 bits (48), Expect = 2.741e-11
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query:  488 DGILGLGFQDIAAGNG--TPLWDNM 556
            DG+LGLGF  I    G  TP+ DN+
Sbjct:  185 DGLLGLGFNTITTVRGVKTPV-DNL 208          
BLAST of EY710093 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  139 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTY 327
            VV L N  D  Y+GEIGIG+PPQ F+V+FDTGSS LWVPSSK         HS Y +  S TY
Sbjct:    6 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKA--------HSMYESSGSSTY 60          
The following BLAST results are available for this feature:
BLAST of EY710093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
CARP_RHICH4.407e-1237.50Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
CARDG_CYNCA2.103e-1157.14Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARP1_RHINI2.741e-1137.76Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 S... [more]
CARDH_CYNCA2.747e-1157.14Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710093 ID=EY710093; Name=EY710093; organism=Citrus sinensis; type=EST; length=943bp
GGGGTCCCGGTCCCGGGATTCCCGGGTCGACCCCGCGTCCGACTGAAGAA
GCGGCAGTTAGGCATTAACACCATCAACGCTGCAAGGTTAATCACTAAAA
ACGAGGTTCACAATCGTTTCAATCATCCTAAAGCAGATGTAGTTTATTTA
AACAACTATCTTGATGCCCAATATTATGGAGAGATTGGTATTGGTTCACC
TCCACAAAGTTTCTCTGTCGTCTTTGATACTGGCAGCTCTAATCTTTGGG
TCCCATCTTCTAAATGCCTTTTTTCTATATCTTGCTATTTACATTCGAGA
TACAGGGCGAGGCTGTCCAGGACTTATACTAAGATTGGAGTACCTTGCAA
AATTCATTATGGCTCTGGACACATTTCTGGCTTCTTCAGCCAAGACAATG
TCAAAATCGCCGATATGATCATCAAGGATCAAGAGTTTGTTGAGGTCACT
AAGGAAGGATTATTACCCTTCCTGGCTCTGCCATTTTGATGGGATTCTTG
GACTTGGGTTTCAGGATATTGCTGCTGGGAATGGCACGCCACTGTGGGAT
AATATGGGCGCGACCAGGTCATATTACCCCGGGAAAAAATTTCTCTGGTC
GGGGCTCAATCCGGGATCAAAATTCAAAATTCGGAGGTGAAAAATTCTTT
GGGAGGTTTTGAATGGAGGGGTTTTTAGGGGTTACCATAATCTATATCCC
AATTACAAGAAAAAGAGTACGGGCAAAATTAGGGGGGGAAATTTTTTTGT
TTTAAAAACCGTTTCAAAGAGGTTTTTAAAAAAATAGGATGCACTGGTCT
ATTTGGAATCGGGGAAAGCGAAAAAATTTGGCGGGCCCAAATTGGAGGAT
GGGGTTCCATTCACATCCTACAGCTAAATGAGAAAGAAAAAAGAATAGGG
TACGACGGAGAGAAGAGAAAATAGTGTGTATTTTTCAATTTAA
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