EY710073

Overview
NameEY710073
Unique NameEY710073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21
Identity = 67/166 (40.36%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   35 CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFGKTNASCLFLL*TAHSRVKFTIPDTIFWKPSLQSIPDFFLGREFQLGP 529
            C+ P    A DF FSG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++HFQ N G T A+      + +  +   IP T+F       I +  L R F L P
Sbjct:   52 CRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGI-VRIPATVFG----SGIREAVLERAFGLTP 209          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.824e-21
Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 2
Query:   23 NGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFGKTNA 400
            +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+HFQ+N G T A
Sbjct:   44 SGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTA 167          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.230e-19
Identity = 53/125 (42.40%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   14 VFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFG 388
            +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF+FP+GL+HF  N+G
Sbjct:   42 LFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYG 163          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.042e-18
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:   20 VNGKFCKDPKLARAEDFFFSGLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFN 382
            +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++HF +N
Sbjct:   46 LNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYN 165          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16
Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   65 DFF-FSGLGKPGNTANRLGVDE---TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFGKTNASCLFLL*TAHSRVKFTIPDTIFWKPSLQSIPDFFLGREFQ 520
            DFF F+G  K  NT++    +    T A + + P LN   +S   + + P    PPH HPR++E+ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A  L    +A   V   +P T+F       I D  L + F+
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGV-VPVPVTVFG----TGIDDAVLAKSFK 195          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.096e-15
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 2
Query:  128 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFGKTNASCLFLL*TAHSRVKFTIPDTIFWKPSLQSIPDFFLGREFQ 520
            T A + + P LN   +S   + Y P    PPH HPR++E+ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A  L    +A + +  ++P T+F      +I D  L + F+
Sbjct:   73 TKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGL-VSVPVTVFG----TNIDDAVLAKSFK 195          
BLAST of EY710073 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.721e-13
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2
Query:   95 GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNFG 388
            GN+ +   +  T A   + P L    +S   + +      PPHIHPRASE+ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G
Sbjct:   58 GNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNG 154          
The following BLAST results are available for this feature:
BLAST of EY710073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL24_ORYSJ2.242e-2140.36Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL813_ORYSJ3.824e-2142.06Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL111_ORYSJ1.230e-1942.40Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ1.042e-1843.09Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ6.319e-1635.90Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ4.096e-1536.64Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ1.721e-1339.80Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710073 ID=EY710073; Name=EY710073; organism=Citrus sinensis; type=EST; length=943bp
GTGTGTTCTTGTAGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGC
TTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAAC
ACAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAAT
TCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCAC
CATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTC
TTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACT
GAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTGTGT
TTCCACAAGGTTTGATTCACTTCCAATTCAACTTTGGAAAAACAAATGCA
AGCTGCCTATTTCTGCTCTAAACAGCCCATTCCCGGGTGAAGTTTACCAT
ACCCGACACAATCTTTTGGAAGCCATCCCTTCAATCAATCCCCGATTTTT
TCTTGGGAAGGGAATTCCAATTGGGACCCAAAAAATAGTGAAAAAATCTT
CAAAAAAAAGATCATTAATGGGGAATTAAGAAAAAGGAAATAAAGAAGCT
TTATAAAAAAAAGGGCCCCTTAACAAGGGGCATGAAATAAATTAACCCTC
CAAGATTAAATATTCTTAAATTAGGGTTAAAAAAAAAGGGAGCCTTAAAA
GGAAACATCTCTCCCGAGATTGGAATTGGGGGCCTGAGATTAATGAAAAG
TAATGTTGGTTTTATGTTTTTCCCGGAGCGGCGACAAAGCAGGCCAGAGA
AAGCTCAAGAACACTGGTATACAACCATAAACACGTGTTTGATTCAAAAA
GAACGAACGCAAAGATTGTATAAAGAGACAAGAAACAAAGATAGAAGAAC
GGCCATGGCGACGATGAGGACACTGCAATAGAAGGAATTATAT
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