EY710056

Overview
NameEY710056
Unique NameEY710056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOLI (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain K12) GN=frmB PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 2.204e-45
Identity = 89/179 (49.72%), Postives = 123/179 (68.72%), Query Frame = 2
Query:    8 EADSWDFGVGAGFYLNATQ*KW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 541
            +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK  W +YD  SL+S+ + V A I++DQG  D F  +QL     E+ C+  N+  L+R+  GYDHSY+F+++FI +
Sbjct:   90 DADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRV-AEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGE 265          
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOLC (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmB PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.204e-45
Identity = 89/179 (49.72%), Postives = 123/179 (68.72%), Query Frame = 2
Query:    8 EADSWDFGVGAGFYLNATQ*KW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 541
            +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK  W +YD  SL+S+ + V A I++DQG  D F  +QL     E+ C+  N+  L+R+  GYDHSY+F+++FI +
Sbjct:   90 DADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRV-AEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGE 265          
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH1_ECODH (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain K12 / DH10B) GN=frmB PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.204e-45
Identity = 89/179 (49.72%), Postives = 123/179 (68.72%), Query Frame = 2
Query:    8 EADSWDFGVGAGFYLNATQ*KW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 541
            +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK  W +YD  SL+S+ + V A I++DQG  D F  +QL     E+ C+  N+  L+R+  GYDHSY+F+++FI +
Sbjct:   90 DADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRV-AEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGE 265          
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIDS (S-formylglutathione hydrolase yeiG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yeiG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.910e-45
Identity = 96/178 (53.93%), Postives = 118/178 (66.29%), Query Frame = 2
Query:   14 DSWDFGVGAGFYLNATQ*KWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 541
            D +D G  AGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D  +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   92 DGYDLGQSAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSRYLGEDKNAWLEWDRCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267          
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH_PARDP (S-formylglutathione hydrolase OS=Paracoccus denitrificans (strain Pd 1222) GN=fghA PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.592e-38
Identity = 83/177 (46.89%), Postives = 112/177 (63.28%), Query Frame = 2
Query:   14 DSWDFGVGAGFYLNATQ*KWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 541
            +++D G GAGFY++AT+  W  ++RM+ YV  ELP+L+  NFP L+     I GHSMGGHGALTI +   ++Y+SVSAFAPI +P    WG+K F  YLG +KA W+ +D+T L+ + K     +LIDQG  D+FL D L P     A          R Q GYDHSYFF+ +F+ D
Sbjct:   96 ETYDLGQGAGFYVDATEAPWAPHFRMWHYVTHELPELVFNNFP-LDREAQGITGHSMGGHGALTIAMTFPERYRSVSAFAPIAHPSESDWGRKQFAAYLGDDKAAWKRHDSTILM-REKGYPGEVLIDQGASDQFL-DLLKPEALAHAMAERRQPGTFRMQQGYDHSYFFVQSFMAD 269          
BLAST of EY710056 vs. ExPASy Swiss-Prot
Match: SFGH_YEAST (S-formylglutathione hydrolase OS=Saccharomyces cerevisiae GN=YJL068C PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.885e-37
Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 2
Query:   17 SWDFGVGAGFYLNATQ*KW-KNWRMYDYVVKELPKLLSENFPQLETSR------ASIFGHSMGGHGALTIYLKNLD--KYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNV-SATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQP--GYDHSYFFIATFIDD 541
            SWDFG GAGFYLNATQ  + ++++MYDY+ KELP+ L  +F +    +       +I GHSMGG+GA+  YLK     +YKS SAFAPI NP N PWGQKAF  YLG  KA WE YD   L+   ++V    ILI  G  D FL + L P    EA ++ +    +  +   G+DHSY+F++TF+ +
Sbjct:  101 SWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPE 287          
The following BLAST results are available for this feature:
BLAST of EY710056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH1_ECOLI2.204e-4549.72S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOLC2.204e-4549.72S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECODH2.204e-4549.72S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH2_SHIDS4.910e-4553.93S-formylglutathione hydrolase yeiG OS=Shigella dys... [more]
SFGH_PARDP7.592e-3846.89S-formylglutathione hydrolase OS=Paracoccus denitr... [more]
SFGH_YEAST2.885e-3745.99S-formylglutathione hydrolase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710056 ID=EY710056; Name=EY710056; organism=Citrus sinensis; type=EST; length=939bp
GGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTAGGTGCTGGATTTTATC
TTAATGCTACACAGTAGAAGTGGAAGAACTGGCGTATGTATGACTATGTT
GTCAAGGAATTGCCCAAACTTCTGAGTGAAAATTTTCCACAGCTTGAAAC
TTCTCGAGCATCCATATTTGGTCACTCAATGGGTGGGCATGGTGCTTTGA
CAATCTATCTGAAAAATCTTGACAAGTATAAGTCTGTATCTGCCTTTGCT
CCAATTTGCAATCCTGTCAACTGTCCCTGGGGTCAGAAGGCTTTTACAAA
TTATCTTGGTAGTAACAAAGCTGATTGGGAGGAATATGATGCCACATCTC
TGGTTTCAAAGAACAAGAATGTATCTGCCACCATCTTGATTGATCAGGGT
CAGGATGACAAATTCTTGCCTGATCAGCTGTTCCCAAACAAGTTTGAGGA
GGCATGCCGGAGTGCCAATGTTGCACTCTTGTTGCGATTTCAGCCTGGTT
ATGATCACTCCTACTTTTTCATTGCTACTTTCATTGATGATCACATCCAC
CATCATGCTCAAGCTCTTAGGCTTTAACTGCTTGAGATTTCCTGGTTCAA
AAATCTGTGATGGTCACATCCCCCACCCATGCTCAACCTTCCAGGCTGTA
ACTTTTTTTTAAATTTTGGTGTTTGGAAAATCCTGGGAACCCTGGTAATC
ATTTAAGACCAACTTTGAAACTTGTTACCTTGGTATGGTCGGGCTGGGGG
GGGGGATTGCTTTTTGAACTACTGGACCAAAATTTTGCATAAAAAAACTA
AAATGGGGGGGTTGGAAAATTATTTTTTCCTTTTTTGNAAAAAACAAAAA
AGAACAACAAATACAAAAAAAAAAAAATAAAAAAGATATAATAAAATAAA
ATATAAAATAGACATATAAAGTTACAAATATGTAATAAG
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