EY710039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF3_RAT (ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus GN=Abcf3 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.360e-23 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 I+ + F Y I+F L+ DL+SRI +VG NG GKST+LKL+ G+L P G ++I FSQHHV+ LDL+ + + + R FPG PE++ R LG +G++G LA++P+ +L SGG SR F Sbjct: 491 ILQLDEVDFYYDPKHIIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASL-----SGGQKSRVAF 621
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF3_HUMAN (ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.360e-23 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 I+ + F Y ++F L+ DL+SRI +VG NG GKST+LKL+ G+L P G ++I FSQHHV+ LDL+ + + + R FPG PE++ R LG +G++G LA++P+ +L SGG SR F Sbjct: 491 ILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPLASL-----SGGQKSRVAF 621
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF3_PONAB (ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.306e-23 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 I+ + F Y ++F L+ DL+SRI +VG NG GKST+LKL+ G+L P G ++I FSQHHV+ LDL+ + + + R FPG PE++ R LG +G++G LA++P+ +L SGG SR F Sbjct: 491 ILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPVASL-----SGGQKSRVAF 621
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF3_MOUSE (ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.306e-23 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 I+ + F Y +F L+ DL+SRI +VG NG GKST+LKL+ G+L P G ++I FSQHHV+ LDL+ + + + R FPG+PE++ R LG +G++G LA++P+ +L SGG SR F Sbjct: 491 ILQLDEVDFYYDPKHSIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAMRPVASL-----SGGQKSRVAF 621
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 IISFSDASFGYPGGP-ILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFP---GVPEQK-LRAHLGSFGVTGNLALQPMYTLSG 369 ++ + SF YP P N++ GID+ +R+A+VGPNG GKST+L L+AG+L P+ G + RS K+RI +SQH VD L + P+ Y++R P G +Q+ +RA LG FG+ + L P+ LSG Sbjct: 495 LLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAKLGKFGLPSHNHLSPIAKLSG 622
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF1_MOUSE (ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.558e-21 Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 ++ +FGY G LFKNL+FGID+DSRI +VGPNG+GKST+L L+ G+L P++G + ++ +++I F+Q + + L + P Y+ R F +P Q R LG FG+ + +T+ SGG +R F Sbjct: 616 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRSF-NLPYQDARKCLGRFGLESH-----AHTIQICKLSGGQKARVVF 745
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF1_RAT (ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus GN=Abcf1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21 Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 ++ +FGY G LFKNL+FGID+DSRI +VGPNG+GKST+L L+ G+L P++G + ++ +++I F+Q + + L + P Y+ R F +P Q R LG FG+ + +T+ SGG +R F Sbjct: 618 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRGF-NLPYQDARKCLGRFGLESH-----AHTIQICKLSGGQKARVVF 747
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF1_PIG (ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 53/136 (38.97%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 ++ +FGY G LFKNL+FGID+DSRI +VGPNG+GKST+L L+ G+L P+ G + ++ +++I F+Q + + L + P Y+ R F +P Q R LG FG+ + +T+ SGG +R F Sbjct: 586 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGF-NLPYQDARKCLGRFGLESH-----AHTIQICKLSGGQKARVVF 715
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF1_PANTR (ATP-binding cassette sub-family F member 1 OS=Pan troglodytes GN=ABCF1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 53/136 (38.97%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 ++ +FGY G LFKNL+FGID+DSRI +VGPNG+GKST+L L+ G+L P+ G + ++ +++I F+Q + + L + P Y+ R F +P Q R LG FG+ + +T+ SGG +R F Sbjct: 586 VLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGF-NLPYQDARKCLGRFGLESH-----AHTIQICKLSGGQKARVVF 715
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF1_HUMAN (ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 53/136 (38.97%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 ++ +FGY G LFKNL+FGID+DSRI +VGPNG+GKST+L L+ G+L P+ G + ++ +++I F+Q + + L + P Y+ R F +P Q R LG FG+ + +T+ SGG +R F Sbjct: 624 VLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGF-NLPYQDARKCLGRFGLESH-----AHTIQICKLSGGQKARVVF 753 The following BLAST results are available for this feature:
BLAST of EY710039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710039 ID=EY710039; Name=EY710039; organism=Citrus sinensis; type=EST; length=885bpback to top |