EY710027

Overview
NameEY710027
Unique NameEY710027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.548e-14
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  150 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            R+ ++   L       I+     D+   F+V+I  P +  + GG F     ++  YP  APKV+  TK+YHPNID  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:    7 RIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.548e-14
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 3
Query:  117 TPVKKQSAGELRLHRDISELNLPKTCSIT-FPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAPAVLGENPK 530
            TP +K      RL RD   L       I+  P+  +  +   V   PD+  + GGTF  T Q +  YP++ P V+  ++++HPNI  +G++CL+IL+  W P+ ++  I+  +  L   PN   P N EA  +  EN +
Sbjct:    3 TPARK------RLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKR 135          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.022e-14
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  150 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLN 494
            R+ ++   L       I+    ++++  F V I  P +  Y GG F     +   YP  APKV+  TK+YHPNID  G +CL+IL++ W P L I T++  +  L + PN +DPL+
Sbjct:    9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLS 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  252 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            P +  + GGTF     +   YP  APKV+  TK+YHPN+D  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:   42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  252 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            P +  + GGTF     +   YP  APKV+  TK+YHPN+D  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:   42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  252 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            P +  + GGTF     +   YP  APKV+  TK+YHPN+D  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:   42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  252 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            P +  + GGTF     +   YP  APKV+  TK+YHPN+D  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:   42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  252 PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHE 500
            P +  + GGTF     +   YP  APKV+  TK+YHPN+D  G +CL+IL++ W P L I T++  +  L + PN +DPL ++
Sbjct:   42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.450e-14
Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  150 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 491
            R+ ++++E+ L  P  CS   P G +        + P    Y GG F      SP YP + PKV  +T++YH NI+ +G +CL+IL+++W P L I+ ++  +  L T  N  DPL
Sbjct:   90 RIQKELAEITLDPPPNCSAG-PKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 204          
BLAST of EY710027 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.450e-14
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  117 TPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAPAVLGENPK 530
            TP +K      RL RD   L       I+     +++M +   I  PD+  + GGTF  + Q S  YP++ P V+  ++++HPNI  +G++CL+IL+  W P+ ++  I+  +  L   PN   P N EA  +  E+ +
Sbjct:    3 TPARK------RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKR 135          
The following BLAST results are available for this feature:
BLAST of EY710027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
UBE2N_DICDI1.548e-1434.75Probable ubiquitin-conjugating enzyme E2 N OS=Dict... [more]
UBC2_WHEAT1.548e-1431.65Ubiquitin-conjugating enzyme E2 2 OS=Triticum aest... [more]
UBC36_ARATH2.022e-1435.34Ubiquitin carrier protein E2 36 OS=Arabidopsis tha... [more]
UBE2N_RAT2.641e-1440.96Ubiquitin-conjugating enzyme E2 N OS=Rattus norveg... [more]
UBE2N_PONAB2.641e-1440.96Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii ... [more]
UBE2N_MOUSE2.641e-1440.96Ubiquitin-conjugating enzyme E2 N OS=Mus musculus ... [more]
UBE2N_HUMAN2.641e-1440.96Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens ... [more]
UBE2N_BOVIN2.641e-1440.96Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN... [more]
UBCD2_DROME3.450e-1434.48Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
UBC2_ARATH3.450e-1430.94Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710027 ID=EY710027; Name=EY710027; organism=Citrus sinensis; type=EST; length=942bp
CGACTCGACCAAGAAGAACAAATCTCCTGCAGCTTCACTCTTAAGCAGGA
AAAATGATTAAGCTGTTCAAAGTCAAGGAGAAGCAAAGGGAAAATGCCGA
AAATGCCAATGGGAAGACACCTGTCAAGAAGCAAAGTGCTGGAGAATTGC
GTCTTCATAGAGACATCAGTGAACTGAACCTACCCAAAACTTGCAGCATA
ACATTTCCCAATGGCAAGGATGACTTGATGAACTTCGAGGTTTCCATTAG
GCCTGACGAAGGATATTATGTAGGTGGTACATTTGTGTTTACTTTCCAAG
TATCTCCCATCTACCCTCATGAGGCACCAAAGGTCAAATGCAAGACAAAG
GTGTACCACCCCAATATCGACCTGGAGGGAAATGTCTGCCTCAACATTTT
AAGAGAAGACTGGAAACCGGTTCTGAATATAAACACCATCATTTATGGAC
TCTTCCATCTTTTCACGCAACCCAATTATGAAGATCCCCTCAATCATGAA
GCACCAGCTGTTTTAGGGGAAAACCCAAAACTGTTTTGAATCCAATGTAA
AAAAAACAATGGCTGGTGAAATTGTGGGGGAAAACCTTCTCATTCGGGGC
ATATAATTTGCTTGGGCCCTGAAAAGCATGTTTGTTTGAAGGGAAAGGAC
CTGTAAATTTGGCCCCAGGGCTGCTTTCTTTTCTAAAAAGGGGTGGGGAC
AAAAATTTCTAAAATACGGCAAAGGGGGGCCAAAATGTTTGGTAGCCGGG
TGAACTTTGTGTGGGGGGGTTGGGATATTGGGCGGAAAACAAAATTTATT
TCCCTTTATTTTCTCGGGAAAATCCAAGGGGGGGGAGCCTCCAGAACCCC
GGCACTTTTGTAAAATTATATACCGGGGGCTATTTTTTTTTTTTTTTTTA
GGGGGGGGGGGGGGGAAAAAAGGATCTTTTATTTTTAGTTTT
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