EY683449

Overview
NameEY683449
Unique NameEY683449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.829e-32
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            A +++PS  R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R    G+KVGLI
Sbjct:  154 AKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.829e-32
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            A +++PS  R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R    G+KVGLI
Sbjct:  154 AKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.829e-32
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            A ++I S  RA++G VAGGGR +KP+LKAG AYHK++VKRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRD P G+KVGLI
Sbjct:  154 AKKVISSTNRAVVGVVAGGGRIDKPILKAGRAYHKYKVKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDVPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_MOUSE (60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_HUMAN (60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
[Close]
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    5 ASEIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259
            + ++I S  RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG  ST+RRDAP G+KVGLI
Sbjct:  154 SKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
The following BLAST results are available for this feature:
BLAST of EY683449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL8_SPOFR1.829e-3272.9460S ribosomal protein L8 OS=Spodoptera frugiperda ... [more]
RL8_MAMBR1.829e-3272.9460S ribosomal protein L8 OS=Mamestra brassicae GN=... [more]
RL8_ICTPU1.829e-3272.9460S ribosomal protein L8 OS=Ictalurus punctatus GN... [more]
RL8_XENTR2.389e-3271.7660S ribosomal protein L8 OS=Xenopus tropicalis GN=... [more]
RL8_XENLA2.389e-3271.7660S ribosomal protein L8 OS=Xenopus laevis GN=rpl8... [more]
RL8_RAT2.389e-3271.7660S ribosomal protein L8 OS=Rattus norvegicus GN=R... [more]
RL8_PONAB2.389e-3271.7660S ribosomal protein L8 OS=Pongo abelii GN=RPL8 P... [more]
RL8_MOUSE2.389e-3271.7660S ribosomal protein L8 OS=Mus musculus GN=Rpl8 P... [more]
RL8_HUMAN2.389e-3271.7660S ribosomal protein L8 OS=Homo sapiens GN=RPL8 P... [more]
RL8_DANRE2.389e-3271.7660S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-050-D08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683449 ID=EY683449; Name=EY683449; organism=Citrus sinensis; type=EST; length=847bp
CCACGCGTCCGAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGG
TTGCCGGCGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCA
TACCACAAATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGT
GGCCATGAACCCAGTGGAGCATCCTCATGGAGGAGGTAACCACCAGCACA
TTGGTCATGCTAGCACTGTTAGGCGTGATGCTCCCCCTGGCCAGAAGGTT
GGTCTTATTGCAGCCAGGAGGACTGGTCGGCTCAGAGGACAAGCTGCTGC
CACTGCAGCCAAGGCCGACAAGGCTTAAATCCTTTGTGTTACCACAAATC
GTCTCTCTATCGCGATCTGTCATTTTACTTTTCCTGCTGCATCATTACCT
TGGAAAAATTTGTTCAGATTTGGATCTCTGGGATGATCCTGATGTTAAAT
TATGTTGGCTTAAAGTTTAGCTTAATTTGCTCTTATCCAAAACTTTAGTT
GATTTTGAAAAAAAAAAAAAAAGGGCGCCACGCACCGTGATCACACCGAG
AAAGATACACATCACAGAAGCAAATAAACACATCTAAACCAGTGCACTAA
CGCGAAATATAACATGCACTCTATTCAAATTCTGTTGAATACCTGACACG
CTAGATATTTCACCACTACGTGAGTCAGACGAACCCTCAATCCGAATAAC
AAAACCATCCCTTGCACTATTTGTACCCTAAGGGTAAAAGTGTGAGTGTA
TACCTAGTCCTCCTTCCGCCAGCATACGCCGGGCGAGGACAGCTGAGCCG
AAGCCCGCGCAGCCGGGCTGTTGGCTTGATGAAAGAGTCCTGGGGCG
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