EY683449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_META3 (50S ribosomal protein L2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKP+ KAG YH + K WP+VRGVAMN V+HP GGGN QH G +T+ R PG+KVG I Sbjct: 156 CRATIGVVAGGGRKEKPITKAGKKYHAMKAKAVLWPRVRGVAMNAVDHPFGGGNTQHAGKPTTISRHTSPGRKVGHI 232
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA++G VAGGGR ++P LKAG YHK + + +P+V GVAMNPV+HP GGG +H G +TV R+APPG+KVGLI Sbjct: 153 CRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METHJ (50S ribosomal protein L2P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl2p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR+EKP +KAG YHK + + WP+VRG AMN ++HP GGG HQH G TV R PG+KVG I Sbjct: 152 CRATIGIVAGGGRSEKPFVKAGKKYHKMKNTASNWPRVRGFAMNVIDHPFGGGGHQHAGRPKTVSRGTSPGRKVGHI 228
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21 Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_THEGJ (50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21 Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_PYRKO (50S ribosomal protein L2P OS=Pyrococcus kodakaraensis GN=rpl2p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21 Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METKA (50S ribosomal protein L2P OS=Methanopyrus kandleri GN=rpl2p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.230e-20 Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG ++GGG+ EKP +KAG Y+ R K WPKVRGVAMN V+HP GGGNHQ G +T+ R PPG+KVG I Sbjct: 156 CRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHI 232
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METPE (50S ribosomal protein L2P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl2p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 23 SGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 S C A +G VAGGGR EKP +KAG +HK + + WP+VRGVAMN ++HP GGG HQH G TV R PG+KVG + Sbjct: 151 SRCLATVGVVAGGGRGEKPFVKAGKKFHKVKSQATYWPRVRGVAMNVIDHPFGGGGHQHTGRPKTVSRGTSPGRKVGSV 229
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METBU (50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl2p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR ++P LKAG YHK + + +P+V G+AMN V+HP GGGN +H G +TV R+APPG+KVG I Sbjct: 153 CRATIGIVAGGGRVDRPFLKAGKKYHKMKARAAKYPRVSGIAMNVVDHPFGGGNRKHPGKPTTVSRNAPPGRKVGHI 229
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METB6 (50S ribosomal protein L2P OS=Methanoregula boonei (strain 6A8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 253 CRA +G VAGGGR EKP +KAGN HK R + WP+VRGVAMN ++HP GGG HQH G T+ R PG+ VG Sbjct: 152 CRATVGIVAGGGRVEKPFVKAGNKSHKMRNTASNWPRVRGVAMNVIDHPFGGGGHQHPGRPKTIARGTSPGRTVG 226 The following BLAST results are available for this feature:
BLAST of EY683449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY683449 ID=EY683449; Name=EY683449; organism=Citrus sinensis; type=EST; length=847bpback to top |