EY683449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METST (50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl2p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 2 Query: 32 RAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 RA +G VAGGGR EKP LKAGN YH + K VRGVAMN V+HPHGGGN QH G +T+ R AP G+KVG I Sbjct: 157 RATVGVVAGGGRKEKPFLKAGNRYHALKAKGKKMMTVRGVAMNAVDHPHGGGNRQHPGRPTTISRHAPAGRKVGSI 232
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20 Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 17 IPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLI 259 + S CR ++G VAGGG +KPLLKA A++K + + + +P+VRGVAMNPVEH HGGGNHQH+G +TV ++D QK+GL+ Sbjct: 144 VSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLV 225
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA++G VAGGGR ++P LKAG YHK + + +P+V VAMNP +HP GGG +H G +TV R+APPG+KVGLI Sbjct: 153 CRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_PYRHO (50S ribosomal protein L2P OS=Pyrococcus horikoshii GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG I Sbjct: 155 CRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_NITMS (50S ribosomal protein L2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 32 RAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 RAMIG +AGGG +E+P + AG + F+ K +P VRGVA HPHGGG HQH+G +STV RD PPG KVG I Sbjct: 155 RAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSI 230
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 29 CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 259 CRA++G VAG GR ++P LKAG YHK + + +P+V VAMNP +HP GGG +H G +TV R+APPG+KVGLI Sbjct: 153 CRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 2 Query: 17 IPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 253 + S RA IG VAGGGR EKP +KAGN YH+ R K +PKVRG AM+ HPHGGG+HQ G + V+++APPGQKVG Sbjct: 152 VDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQQGG--TPVKKNAPPGQKVG 228
BLAST of EY683449 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 49/92 (53.26%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 2 HASEIIPSG--------CRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 253 H + +PSG CRA +G VA G + P+LKAG H R K VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 130 HVTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221 The following BLAST results are available for this feature:
BLAST of EY683449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY683449 ID=EY683449; Name=EY683449; organism=Citrus sinensis; type=EST; length=847bpback to top |