EY683369

Overview
NameEY683369
Unique NameEY683369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKK 307
            DR KD+I SGGE IS+VE+E++  +HP +++A+V+A   + W + P             + E+  +  D +  +  P   IF E+LP+  TGK+ K  LR+K
Sbjct:  431 DRAKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERPLLIAVKSPNSELTSGEVCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRLREK 532          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSA_STRAW (Acetyl-coenzyme A synthetase OS=Streptomyces avermitilis GN=acsA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = 2
Query:    8 RLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAP-----KTVIFEDLPKTSTGKVQKFILRKKAE--ALGSLS 331
            R+ DV++  G NIS+ EVE+ L SHP+V EA+VV   D+  GQ   AFV L+   +A+   ++   R+H+   + P     + +   +LPKT +GK+ + +LR  AE  ALG ++
Sbjct:  516 RVDDVMLVSGHNISTTEVESALVSHPSVAEAAVVGAADETTGQAIVAFVILRGTANAEDDNLVADLRNHVGTTLGPIAKPKRILPVAELPKTRSGKIMRRLLRDVAENRALGDVT 630          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACS2_ZYGBA (Acetyl-coenzyme A synthetase 2 OS=Zygosaccharomyces bailii GN=ACS2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 2
Query:    2 KDRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADA-------QEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRK----KAEALGSLS 331
            + R+ DV+   G  +S+ E+E  L +H  V E++VV   D+  GQ+  AFV LK+G S ++       +E++   R  +  + APK VI  +DLPKT +GK+ + +LRK    +A+ LG LS
Sbjct:  529 RGRVDDVVNVSGHRLSTAEIEASLTNHDNVSESAVVGIADELTGQSVIAFVSLKDGSSRESSAVVAMRRELVLQVRGEIGPFAAPKCVILVKDLPKTRSGKIMRRVLRKVASNEADQLGDLS 650          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAW (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MW2) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAU (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAT (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAS (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MSSA476) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAE (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Newman) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAC (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain COL) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAA8 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain NCTC 8325) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
The following BLAST results are available for this feature:
BLAST of EY683369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
ALKK_PSEOL3.565e-1235.29Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas... [more]
ACSA_STRAW3.565e-1237.39Acetyl-coenzyme A synthetase OS=Streptomyces averm... [more]
ACS2_ZYGBA4.656e-1236.89Acetyl-coenzyme A synthetase 2 OS=Zygosaccharomyce... [more]
MENE_STAAW6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAU6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAT6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAS6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAE6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAC6.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA86.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-049-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683369 ID=EY683369; Name=EY683369; organism=Citrus sinensis; type=EST; length=846bp
AAAGGATCGATTGAAGGATGTAATAATTTCTGGTGGAGAGAATATAAGCT
CCGTAGAGGTAGAAACAGTATTGTTCAGTCATCCAGCAGTTCTCGAAGCT
TCTGTTGTTGCAAGGCCAGATGATCACTGGGGACAGACACCTTGTGCATT
TGTTAAGTTAAAAGAAGGATATAGTGCTGATGCTCAAGAAATAATCAAGT
TTTGCCGGGATCACTTGCCACATTATATGGCTCCTAAGACAGTCATTTTT
GAAGACTTGCCCAAAACTTCAACAGGAAAAGTGCAAAAGTTCATACTGAG
GAAGAAAGCAGAGGCCCTGGGCAGCCTTTCTTAATCCTAAAACAAATGTA
AAGTCATGTTTCCAAATAAAATGTCACTTTCATCACATGGTCATTGATTA
TTACAATCTTCGCAAGCTGGAGAGCCATAATAAATGTCAATTGTACATGG
CATTTGCTTTAATGTCAAAATTGTCATCATTGTATAGCAGAATCCAGCAC
TTTTATGATCCNNAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAACACAAAAAAAAAGAAAAAAAAAAGAAACAAAAAAACAAAAAAA
AAAAGGGGGGGGCCCCTCTAAAGAATCAACGTTAACTTACCCGGGCTGGG
CAACTAAATATCCTTTCAAAGGGGCCCCCAAAATTAATTTCGGGGGCCGC
CCTTTTTAACCCCCCGGGGGGGGAAAAACCCCGGGGTTTTCCCAATTTAA
TCCCCCTTTGGCCCAACCCCCCTTTCCCCCGGGGGGGGAAAAAAAAAAAA
AGGCCCCCCCCCCAATCCCCCCTCCCACAAATTTGCCCCCCCCCGG
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