EY683369

Overview
NameEY683369
Unique NameEY683369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAA3 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300) GN=menE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSF3_HUMAN (Acyl-CoA synthetase family member 3, mitochondrial OS=Homo sapiens GN=ACSF3 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = 2
Query:   17 DVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAP-KTVIFEDLPKTSTGKVQK 289
            D+I +GG  +S++EVE  L +HP++ + +V+  PD  WGQ   A V L+EG+S   +E+ ++ R+ L  Y  P + V+ E++P+   GK+ K
Sbjct:  475 DIIKTGGYKVSALEVEWHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHSLSHRELKEWARNVLAPYAVPSELVLVEEIPRNQMGKIDK 566          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAN (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain N315) GN=menE PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAM (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=menE PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAAB (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=menE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSQHLAKYKIPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAA9 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain JH9) GN=menE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAA2 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain JH1) GN=menE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_STAA1 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=menE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIFED-LPKTSTGKVQK 289
            DR KD+IISGGENI   ++ETV    P + +A  V  PDD WGQ P  +   +   S    ++I +   HL  Y  PK     D LP TSTGK+Q+
Sbjct:  393 DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDIS--KAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQR 486          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSA_COPC7 (Acetyl-coenzyme A synthetase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACS-1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2
Query:    2 KDRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSAD-------AQEIIKFCRDHLPHYMAPKTV-IFEDLPKTSTGKVQKFILRK----KAEALGSLS 331
            K R+ DVI   G  +S+ E+E+ L +H  V E +V+   D+  GQ   AFV LK  +  D       ++E+I   R  +  + APK + I  DLPKT +GK+ + ILRK    +A+ LG LS
Sbjct:  521 KGRVDDVINVSGHRLSTAEIESALITHTGVAETAVIGTADELTGQAVYAFVTLKPEFKFDPENEAGLSKELILQVRKIIGPFAAPKRIYIVSDLPKTRSGKIMRRILRKIVAGEADQLGDLS 642          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACS2_CANAL (Acetyl-coenzyme A synthetase 2 OS=Candida albicans GN=ACS2 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 2
Query:    2 KDRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSAD-----AQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRK----KAEALGSLS 331
            + R+ DV+   G  +S+ E+E  L     V EA+VV   DD  GQ   A+V LKEG S +      +E++   R  +  + APK+VI  +DLPKT +GK+ + ILRK    +A+ LG +S
Sbjct:  530 RGRVDDVVNVSGHRLSTAEIEAALIEDKKVSEAAVVGIHDDITGQAVIAYVALKEGNSDEDSEGLRKELVLQVRKTIGPFAAPKSVIIVQDLPKTRSGKIMRRILRKVSSNEADQLGDIS 649          
The following BLAST results are available for this feature:
BLAST of EY683369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
MENE_STAA36.081e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
ACSF3_HUMAN6.081e-1236.96Acyl-CoA synthetase family member 3, mitochondrial... [more]
MENE_STAAN7.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAM7.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAB7.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA97.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA27.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA17.942e-1242.712-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
ACSA_COPC77.942e-1237.70Acetyl-coenzyme A synthetase OS=Coprinopsis cinere... [more]
ACS2_CANAL7.942e-1238.33Acetyl-coenzyme A synthetase 2 OS=Candida albicans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-049-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683369 ID=EY683369; Name=EY683369; organism=Citrus sinensis; type=EST; length=846bp
AAAGGATCGATTGAAGGATGTAATAATTTCTGGTGGAGAGAATATAAGCT
CCGTAGAGGTAGAAACAGTATTGTTCAGTCATCCAGCAGTTCTCGAAGCT
TCTGTTGTTGCAAGGCCAGATGATCACTGGGGACAGACACCTTGTGCATT
TGTTAAGTTAAAAGAAGGATATAGTGCTGATGCTCAAGAAATAATCAAGT
TTTGCCGGGATCACTTGCCACATTATATGGCTCCTAAGACAGTCATTTTT
GAAGACTTGCCCAAAACTTCAACAGGAAAAGTGCAAAAGTTCATACTGAG
GAAGAAAGCAGAGGCCCTGGGCAGCCTTTCTTAATCCTAAAACAAATGTA
AAGTCATGTTTCCAAATAAAATGTCACTTTCATCACATGGTCATTGATTA
TTACAATCTTCGCAAGCTGGAGAGCCATAATAAATGTCAATTGTACATGG
CATTTGCTTTAATGTCAAAATTGTCATCATTGTATAGCAGAATCCAGCAC
TTTTATGATCCNNAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAACACAAAAAAAAAGAAAAAAAAAAGAAACAAAAAAACAAAAAAA
AAAAGGGGGGGGCCCCTCTAAAGAATCAACGTTAACTTACCCGGGCTGGG
CAACTAAATATCCTTTCAAAGGGGCCCCCAAAATTAATTTCGGGGGCCGC
CCTTTTTAACCCCCCGGGGGGGGAAAAACCCCGGGGTTTTCCCAATTTAA
TCCCCCTTTGGCCCAACCCCCCTTTCCCCCGGGGGGGGAAAAAAAAAAAA
AGGCCCCCCCCCCAATCCCCCCTCCCACAAATTTGCCCCCCCCCGG
back to top