EY709057

Overview
NameEY709057
Unique NameEY709057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 108/150 (72.00%), Postives = 123/150 (82.00%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAP 461
            DKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I    KMD      +    EI++E  ++++++   P
Sbjct:   36 DKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDT-TQWSQTRFEEIIKETKNFIKKVGYNP 184          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 111/163 (68.10%), Postives = 130/163 (79.75%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEK-PLPPLLCFXG 497
            D+R IE+FEKEAAE+ K SFKYAWVLDKLK+ERERGITIDIALWKF+T+KY  TVIDAPGHRDFIKNMITGTSQADCA+LII S TG FEAGISKDGQTREHALLAFTLGV+Q+I    KMD      +    EIV+E S++++++   P+  P  P+  F G
Sbjct:   36 DQRTIEKFEKEAAELGKGSFKYAWVLDKLKSERERGITIDIALWKFQTSKYEVTVIDAPGHRDFIKNMITGTSQADCAILIIASGTGEFEAGISKDGQTREHALLAFTLGVRQLIVALNKMDT-CKWSQDRYNEIVKETSNFIKKVGYNPKSVPFVPISGFNG 197          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 110/163 (67.48%), Postives = 128/163 (78.53%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEK-PLPPLLCFXG 497
            D R IE+FEKEA E+ K+SFKYAWVLDKLK+ERERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I    KMD           EI++EVS++++++   P+  P  P+  F G
Sbjct:   36 DSRTIEKFEKEAEELGKKSFKYAWVLDKLKSERERGITIDIALWKFETPKYSVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDT-TKWSESRFNEIIKEVSNFIKKVGYNPKAVPFVPISGFEG 197          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.895e-54
Identity = 112/168 (66.67%), Postives = 126/168 (75.00%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEKPLPPLLCFXGTEGWKG 515
            DKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWK ET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I    KMD           EIV+E S++++++   P+      + F    GW G
Sbjct:   35 DKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKSETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDT-TNWSEARFNEIVKETSNFIKKVGYNPK-----TVAFVPISGWHG 196          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.895e-54
Identity = 112/168 (66.67%), Postives = 127/168 (75.60%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEKPLPPLLCFXGTEGWKG 515
            DKR IE+FEKEA E+ K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII +  G FEAGISKDGQTREHALLAFTLGV+Q+I  C KMD           EIV+E + +++++   P K +P    F    GW G
Sbjct:   35 DKRTIEKFEKEAQELGKSSFKYAWVLDKLKAERERGITIDIALWKFETPRYQVTVIDAPGHRDFIKNMITGTSQADCAILIIATGIGEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMDT-CKWSEDRFNEIVKETNGFIKKVGYNP-KAVP----FVPISGWHG 196          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 3.232e-54
Identity = 112/168 (66.67%), Postives = 128/168 (76.19%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEKPLPPLLCFXGTEGWKG 515
            DKR IE+FEKEA E+ K SFKYAWVLDKLKAERERGITIDIALWKF+T KYY TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGVKQ+I    KMD+     +    EI +E +++++++   P K +P    F    GW G
Sbjct:   35 DKRTIEKFEKEADELGKGSFKYAWVLDKLKAERERGITIDIALWKFQTPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVKQLIVAINKMDS-VKWSQDRYNEICKETANFVKKVGYNP-KSVP----FVPISGWNG 196          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.404e-54
Identity = 113/170 (66.47%), Postives = 127/170 (74.71%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPG-LRG*VREIVREVSSYLRRLDSAPEK-PLPPLLCFXGTEGWKG 515
            DKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  C KMD       +    E+ +E+  YL+++   P K P  P      T GW G
Sbjct:   35 DKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYNFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSKERYEEVSKEMDLYLKKVGYNPPKVPKVP------TSGWTG 198          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.736e-53
Identity = 112/170 (65.88%), Postives = 127/170 (74.71%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPG-LRG*VREIVREVSSYLRRLDSAPEK-PLPPLLCFXGTEGWKG 515
            +KR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  C KMD       +    E+ +E+  YL+++   P K P  P      T GW G
Sbjct:   35 EKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETEKYSFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSQDRYEEVSKEMDLYLKKVGYNPAKVPKVP------TSGWTG 198          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.573e-53
Identity = 107/153 (69.93%), Postives = 122/153 (79.74%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDA-PPPGLRG*VREIVREVSSYLRRLDSAPEK 467
            D R IE+FEKE+AEM K SFKYAWVLDKLKAERERGITIDIALWKFET   + T+IDAPGHRDFIKNMITGTSQAD A+LII S TG FEAGISK+GQTREHALLA+T+GVKQM+    KMD+  PP       EI +EVS++L ++   P K
Sbjct:   35 DARTIEKFEKESAEMGKASFKYAWVLDKLKAERERGITIDIALWKFETENRHYTIIDAPGHRDFIKNMITGTSQADAAILIIASGTGEFEAGISKEGQTREHALLAYTMGVKQMVVAMNKMDSTEPPYSEDRYEEIKKEVSTFLAKVGYKPAK 187          
BLAST of EY709057 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.961e-53
Identity = 108/163 (66.26%), Postives = 128/163 (78.53%), Query Frame = 3
Query:   12 DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMISCCTKMDAPPPGLRG*VREIVREVSSYLRRLDSAPEK-PLPPLLCFXG 497
            D+R IE+FEKE+AEM K SFKYAWVLD LKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD A+LI+ + TG FEAGISK+GQTREH LL++TLGVKQMI    KMDA          EI +E+S++L++    P+K P  P+  F G
Sbjct:   35 DQRTIEKFEKESAEMGKGSFKYAWVLDNLKAERERGITIDISLWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVAAGTGEFEAGISKNGQTREHILLSYTLGVKQMIVGVNKMDAIQYKQER-YEEIKKEISAFLKKTGYNPDKIPFVPISGFQG 196          
The following BLAST results are available for this feature:
BLAST of EY709057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_NEUCR8.505e-5572.00Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_ASPOR1.111e-5468.10Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_AJECG1.111e-5467.48Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A_PIRIN1.895e-5466.67Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A_CRYNE1.895e-5466.67Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A_YARLI3.232e-5466.67Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1AC_PORPU9.404e-5466.47Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_PORYE2.736e-5365.88Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A1_EUPCR3.573e-5369.93Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_ENTHI7.961e-5366.26Elongation factor 1-alpha OS=Entamoeba histolytica... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709057 ID=EY709057; Name=EY709057; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCT
GAGATGAACAAGAGGTCATTCAAGTACGCCTGGGTGCTCGACAAGCTCAA
GGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCG
AGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTGAC
TTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCT
TATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGATG
GTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAG
ATGATTTCCTGCTGTACCAAGATGGACGCCCCACCCCCAGGACTCAGAGG
CTAGGTACGAGAAATTGTGAGGGAGGTCTCTTCCTACCTAAGAAGGTTGG
ATTCTGCCCCCGAAAAGCCCCTTCCTCCCCTTCTTTGTTTCNATGGGACA
GAAGGGTGGAAGGGGAGCAGACGGGATGGAATAGAATGCATATGTGGTGG
GCTTTGGTTGAGTGCGATGAAGCCGCAGGCGCTCTAAGCGTCCCCGCGTA
TAGTAGGGGGGGGGGGGGCGGGGGCGGTGGTGGGGGGGGGGGGGGTGGGG
TTTTGCGGGCGTTCTTGTGAGTGAGGTGGTGTGGGGGAGGCGGGAGGAGG
GGGGGCAGGGGGGGGGGAGAGCGCGGGGCGGGTCGGGGTGGGCGGGGTGC
GGTGCGAGTCACGCGTACGAGGACTATCGGACCGAAGGGTGTTTTGCTGG
CTGACGGCGGATGCGGCTTGCGGTGGGATTTGTCTGATCGAGCTTGTTTG
GTGGTTTGTTTGATTCCTCTCTCCGTTTTGTGTTTTCTTCTGTTCTCGAT
GGTTGC
back to top