EY709051

Overview
NameEY709051
Unique NameEY709051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBC (Serine hydroxymethyltransferase OS=Acinetobacter baumannii (strain ACICU) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  108 WGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            + N S+   DPE+   I  E  RQ   IELIASEN+ S AV+EA GS LTNKY+EG PG RYYGG EF+D IE +   RA + F  D      NVQP++GS AN A Y A+L P D ++G+ L  GGHLTHG   S  GK Y A       + + +N  TG IDY  +   AL+ +P + V
Sbjct:    2 FANISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEFVDVIEQMAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHGAKVSFSGKTYNA-------VQYGLNAETGEIDYEEVERLALEHKPRMIV 171
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_ACIB5 (Serine hydroxymethyltransferase OS=Acinetobacter baumannii (strain AB0057) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  108 WGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            + N S+   DPE+   I  E  RQ   IELIASEN+ S AV+EA GS LTNKY+EG PG RYYGG EF+D IE +   RA + F  D      NVQP++GS AN A Y A+L P D ++G+ L  GGHLTHG   S  GK Y A       + + +N  TG IDY  +   AL+ +P + V
Sbjct:    2 FANISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEFVDVIEQMAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHGAKVSFSGKTYNA-------VQYGLNAETGEIDYEEVERLALEHKPRMIV 171
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_ACIB3 (Serine hydroxymethyltransferase OS=Acinetobacter baumannii (strain AB307-0294) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 3 
Query:  108 WGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            + N S+   DPE+   I  E  RQ   IELIASEN+ S AV+EA GS LTNKY+EG PG RYYGG EF+D IE +   RA + F  D      NVQP++GS AN A Y A+L P D ++G+ L  GGHLTHG   S  GK Y A       + + +N  TG IDY  +   AL+ +P + V
Sbjct:    2 FANISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEFVDVIEQMAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHGAKVSFSGKTYNA-------VQYGLNAETGEIDYEEVERLALEHKPRMIV 171
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_NOSP7 (Serine hydroxymethyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 84/175 (48.00%), Postives = 108/175 (61.71%), Query Frame = 3 
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            L + DP I  LI  E +RQ   +ELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG E+ID+IE L  +RA Q F         NVQP+SG+ ANFA + ++L+P D+IMG+DL  GGHLTH      G     +  +F+   + V+  T  +DY  I   AL  RP L +
Sbjct:    9 LSSTDPAIAELINDELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEYIDKIEQLAINRAKQIFGAA----HANVQPHSGAQANFAVFLSLLQPGDKIMGMDLSHGGHLTH------GSPVNVSGKWFQVSHYGVSQQTEQLDYDQIRELALRERPKLLI 173
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPS (Serine hydroxymethyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 82/176 (46.59%), Postives = 109/176 (61.93%), Query Frame = 3 
Query:  120 SLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDYIIGGE-ALDFRPNLTV 644
            +LE  D +I +L++KEK RQ  +IELIASENF S AV+EA+GS LTNKY+EG P  RYYGG   +DE+E+L R R  + F  +      NVQP+SGS AN A Y ++LE  D ++G+DL  GGHLTHG   +   R       F  +++ V+  T  I+Y    E AL  +P L V
Sbjct:    5 NLEREDEQIAHLVQKEKERQENSIELIASENFVSKAVMEAMGSYLTNKYAEGYPSKRYYGGCHVVDEVEDLARERVKKLFGAE----HANVQPHSGSQANMAVYFSILESGDTVLGMDLSHGGHLTHGSPVNFSGR------LFNFVSYGVDKETETINYETVRELALKHKPKLIV 170
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 3 
Query:  117 SSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDYIIGGE-ALDFRPNLTV 644
            + L+  D +I+ +IE+E  RQ   IELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG   +D+ E+L R R  + F+ +     VNVQP+SGS AN A Y +VL+P D ++G+ L  GGHLTHG   S  GK Y   S       + +N  T  IDY    E AL  +P + V
Sbjct:    4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTHGSKVSFSGKLYNFVS-------YGLNSDTEIIDYDEMRELALKHKPKMIV 170
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 3 
Query:  117 SSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDYIIGGE-ALDFRPNLTV 644
            + L+  D +I+ +IE+E  RQ   IELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG   +D+ E+L R R  + F+ +     VNVQP+SGS AN A Y +VL+P D ++G+ L  GGHLTHG   S  GK Y   S       + +N  T  IDY    E AL  +P + V
Sbjct:    4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTHGSKVSFSGKLYNFVS-------YGLNSDTEIIDYDEMRELALKHKPKMIV 170
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 87/176 (49.43%), Postives = 106/176 (60.23%), Query Frame = 3 
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDYIIGGE-ALDFRPNLTV 644
            L+  D E+   +  E  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F+       VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTHG   +  G+ Y A S       + V   TG ID  +  E A   RP L +
Sbjct:    6 LQMQDKEVFEAVVNETVRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFNCS----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHGSPVNFSGQLYEAHS-------YGVRRETGCIDMNMVEELANKVRPKLII 170
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CLAMS (Serine hydroxymethyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=glyA PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.123e-33
Identity = 82/185 (44.32%), Postives = 113/185 (61.08%), Query Frame = 3 
Query:   96 PVNEWGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            PV++  N+ L  VDPEI  ++E+E  RQ   +E+IASENF   AV+++ GS LTNKY+EG PG RYYGG EF+D  E L   RA   F  +      NVQP+SG+ AN A   A+ +P D I+GL+L  GGHLTHG   +  GK Y       ++ A+ V+P T  ID  ++  +AL+ RP + +
Sbjct:    2 PVDQSFNAPLSEVDPEIAAVLEQELGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKSLFGAE----FANVQPHSGATANAAVLAAIAQPGDTILGLELAHGGHLTHGMKLNFSGKLY-------DAAAYGVDPDTFLIDMDVVREKALEHRPQVII 175
[Close]
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CHLL2 (Serine hydroxymethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glyA PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.123e-33
Identity = 86/175 (49.14%), Postives = 105/175 (60.00%), Query Frame = 3 
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDYIIGGE-ALDFRPNLTV 644
            L   D E+   I  E  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F        VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTH      G     +   F++ ++ V+  TG ID     E AL+ RP L +
Sbjct:    6 LRMQDKEVFEAIAGETLRQTETLELIASENFTSRAVMQACGSLMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCQ----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSPVNFSGQLFDAHSYGVDRETGCIDMNRVEELALEVRPKLII 170
The following BLAST results are available for this feature:
BLAST of EY709051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_ACIBC2.417e-3346.96Serine hydroxymethyltransferase OS=Acinetobacter b... [more]
GLYA_ACIB52.417e-3346.96Serine hydroxymethyltransferase OS=Acinetobacter b... [more]
GLYA_ACIB32.417e-3346.96Serine hydroxymethyltransferase OS=Acinetobacter b... [more]
GLYA_NOSP73.157e-3348.00Serine hydroxymethyltransferase OS=Nostoc punctifo... [more]
GLYA_CLOPS3.157e-3346.59Serine hydroxymethyltransferase OS=Clostridium per... [more]
GLYA_CLOK53.157e-3347.19Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_CLOK13.157e-3347.19Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_CHLPD3.157e-3349.43Serine hydroxymethyltransferase OS=Chlorobium phae... [more]
GLYA_CLAMS4.123e-3344.32Serine hydroxymethyltransferase OS=Clavibacter mic... [more]
GLYA_CHLL24.123e-3349.14Serine hydroxymethyltransferase OS=Chlorobium limi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709051 ID=EY709051; Name=EY709051; organism=Citrus sinensis; type=EST; length=769bp
CTCATTTATTCTTTTTTTCTGTCTAAATCCATTTTCATTTTCCCTTTTTT
TCGTTTTCAGTGAATCCAGAAAACGGAAAAAAAGAAAAAATGGATCCAGT
GAACGAGTGGGGCAACTCATCTCTTGAAACCGTGGACCCAGAAATTCACT
ACCTGATCGAGAAAGAGAAGCGCCGACAATGCCGCGCCATCGAGCTCATC
GCCTCCGAGAACTTCACCTCCTTCGCCGTTATCGAAGCCCTCGGCAGCGC
CCTCACCAACAAATACTCAGAGGGAATGCCCGGCAACCGTTACTACGGAG
GCAACGAATTCATCGACGAGATCGAGAATCTCTGCCGGTCGAGAGCTTTA
CAAACTTTCCATTTGGACCCCACCCAGTGGGGTGTCAACGTTCAGCCTTA
CTCCGGCTCGCCGGCCAACTTCGCCGCTTACACGGCGGTGCTCGAGCCTC
ATGACCGTATCATGGGGCTGGACTTGCCGTCCGGAGGGCATTTGACTCAT
GGGTATTACACTTCTGGCGGGAAAAGATATCGGGCGACTTCCATTTACTT
CGAGAGCTTGGCGCACCAGGTGAATCCGAGTACTGGGTATATTGATTACA
TCATTGGAGGAGAAGCGTTGGATTTTAGGCCGAATCTGACCGTTTGGCGT
GGAAATGATTTCGAGGGGAGTGACGATATGTATGAATTGGGGTGGTGGCG
GGACGGGGGGCGCGTGGTGGGCGTGGAGAGGGAGGGCGGCGAGGGCGGGG
GGGGCGTGGTGAGGGTCGG
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