EY709051

Overview
NameEY709051
Unique NameEY709051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_AMOA5 (Serine hydroxymethyltransferase OS=Amoebophilus asiaticus (strain 5a2) GN=glyA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34
Identity = 85/171 (49.71%), Postives = 103/171 (60.23%), Query Frame = 3
Query:  135 DPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            D +I  LIEKE +RQ   +ELIASENF S  ++EA GS LTNKY+EG+PG RYYGG E +DEIE L   RA   FH     W  NVQP+SGS AN A   AVLEP D+I+G +L  GGHLTH      G     +   +ES  + V P TG ID+  +G  A    P L +
Sbjct:    4 DTQIFTLIEKEYQRQNEGLELIASENFVSQQIMEAAGSILTNKYAEGLPGRRYYGGCEIVDEIETLAIERAKSLFH---ASW-ANVQPHSGSQANAAVMFAVLEPGDKILGFNLAHGGHLTH------GSPVNFSGQLYESHFYGVQPETGLIDWEEVGTIAEQVNPKLII 164          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34
Identity = 81/162 (50.00%), Postives = 101/162 (62.35%), Query Frame = 3
Query:  114 NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599
            N  +   D +I  LI KE  RQ   IELIASEN+ S  V++A GS+LTNKY EG PG RYYGG EF+DEIE + + RA + F+        NVQPYSGS AN A Y A+L P D ++GL L SGGHLTHGY      R   + I+++S  + VN   G +DY
Sbjct:    2 NKKVTLHDQDIADLINKESHRQEEHIELIASENYVSEDVMKAAGSSLTNKYGEGYPGKRYYGGCEFVDEIEKIAQERACKLFNAK----YANVQPYSGSVANAAIYMALLNPGDSVLGLSLDSGGHLTHGY------RISFSGIFYKSYTYTVN-QDGVLDY 152          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34
Identity = 84/175 (48.00%), Postives = 107/175 (61.14%), Query Frame = 3
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            L+  D E+   I  E +RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  +     VNVQP+SGS AN A   +VL+P D+IMGLDL  GGHLTH      G     +   FE+ ++ V+  TG ID   +   A+  RP L +
Sbjct:    6 LQKQDAEVFASIANETKRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDKIMGLDLSHGGHLTH------GSSVNFSGQMFEAHSYGVDRETGCIDMNKVEEMAMQVRPKLII 170          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 3
Query:  114 NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGY-YTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTVWRGNDF 662
            + SL   DP+I   I  E+RRQ   +ELIASENF S AV++A GS  TNKY+EG PG RYYGG E+ D +ENL R RA + F  +      NVQP+SGS AN  AY A+L+P D I+GL+L  GGHLTHG+     GK Y+        + + V   T  IDY  +   AL+  P + V  G+ +
Sbjct:    6 SQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGHPLNFSGKTYKI-------VPYGVTKETETIDYDELEKLALEHHPKVIVGGGSAY 179          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_THEM4 (Serine hydroxymethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 82/157 (52.23%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  108 WGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVN 575
            W N  ++ VDPEI+ +I KE  RQ   +ELIASENF S AVIEA+GS LTNKY+EG PG RYYGG E++D  E L R RA + F++       NVQP+SGS AN  AY AV EP D IMG+ L  GGHLTHG   +  G+ Y   S   +S    +N
Sbjct:    2 WEN--VKKVDPEIYEVILKEWDRQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTHGAPVNFSGRIYNVVSYGVDSETEVIN 152          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_PROMA (Serine hydroxymethyltransferase OS=Prochlorococcus marinus GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 3
Query:  114 NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            NS L   DP+I +LI +E  RQ   +ELIASENF S AV+EA GS LTNKY+EG+P  RYYGG E ID IE L  +RA   F+    +W  NVQP+SG+ ANFA + A+L P D IMG+DL  GGHLTH      G     +  +F ++ + V+ +T  +++  I   AL  RP L +
Sbjct:    5 NSDLRNTDPDISFLINQELLRQQTHLELIASENFASEAVMEAQGSVLTNKYAEGLPNKRYYGGCEHIDAIEQLAITRAQTLFN---AEW-ANVQPHSGAQANFAVFLALLNPGDTIMGMDLSHGGHLTH------GSPVNVSGKWFNAIHYGVDQTTKVLNFEQIRQVALKNRPKLII 172          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 85/175 (48.57%), Postives = 108/175 (61.71%), Query Frame = 3
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            L+  D E+   I  E  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  E+L R RA + F  +     VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTH      G     +   F++ ++ V+  TG ID   +   ALDF+P L +
Sbjct:    6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDFKPRLII 170          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 78/159 (49.06%), Postives = 104/159 (65.41%), Query Frame = 3
Query:  123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599
            L+  DP ++ + EKE +RQ   +E+IASENFTS AV+EA+GS  TNKY+EG PG RYYGG E+ D IE L   RA + F  +     VNVQP+SGS AN   Y A+L+P+D+I+G+DL  GGHLTH      G +  A+   ++S  + VN   G+IDY
Sbjct:    4 LKNQDPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTH------GAKVNASGKIYQSFFYGVN-DEGWIDY 151          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_LACPL (Serine hydroxymethyltransferase OS=Lactobacillus plantarum GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 3
Query:  135 DPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            DPE+   I KE+ RQ   IELIASEN  S  V  A GS LTNKYSEG PG+R+YGGNE+ID++E L   RA + F  +      NVQP+SGS AN AAY A+++P DR+MG+ L +GGHLTHG   +  GK Y       +   + ++P T  ++Y  I  +A DF+P L V
Sbjct:    7 DPEVWAAISKEQARQQHNIELIASENIVSKGVRAAQGSVLTNKYSEGYPGHRFYGGNEYIDQVETLAIERAKKLFGAE----YANVQPHSGSQANAAAYMALIQPGDRVMGMSLDAGGHLTHGSSVNFSGKLY-------DFQGYGLDPETAELNYDAILAQAQDFQPKLIV 167          
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYA_DESHD (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34
Identity = 83/186 (44.62%), Postives = 114/186 (61.29%), Query Frame = 3
Query:   90 MDPVNEWGNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644
            MD + EW    +   DPE+   I +E++RQ   IELIASENF S AV+ A GS LTNKY+EG PG RYYGG E++D +E+L R R  + F  +      NVQP+SG+ AN A Y A+L+P D ++G++L  GGHLTH      G     + +Y+  +A+ V+  T  IDY ++   AL+ RP L V
Sbjct:    1 MDYIKEW----ILPQDPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAE----HANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTH------GSPVNISGMYYNFVAYGVDQVTERIDYDVVRQLALEHRPKLIV 172          
The following BLAST results are available for this feature:
BLAST of EY709051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_AMOA53.729e-3449.71Serine hydroxymethyltransferase OS=Amoebophilus as... [more]
GLYA_MYCA54.871e-3450.00Serine hydroxymethyltransferase OS=Mycoplasma arth... [more]
GLYA_CHLCH4.871e-3448.00Serine hydroxymethyltransferase OS=Chlorobium chlo... [more]
GLYA_ACIBL4.871e-3445.95Serine hydroxymethyltransferase OS=Acidobacteria b... [more]
GLYA_THEM46.362e-3452.23Serine hydroxymethyltransferase OS=Thermosipho mel... [more]
GLYA_PROMA6.362e-3447.19Serine hydroxymethyltransferase OS=Prochlorococcus... [more]
GLYA_PELLD6.362e-3448.57Serine hydroxymethyltransferase OS=Pelodictyon lut... [more]
GLYA_NITSB6.362e-3449.06Serine hydroxymethyltransferase OS=Nitratiruptor s... [more]
GLYA_LACPL6.362e-3448.26Serine hydroxymethyltransferase OS=Lactobacillus p... [more]
GLYA_DESHD6.362e-3444.62Serine hydroxymethyltransferase OS=Desulfitobacter... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709051 ID=EY709051; Name=EY709051; organism=Citrus sinensis; type=EST; length=769bp
CTCATTTATTCTTTTTTTCTGTCTAAATCCATTTTCATTTTCCCTTTTTT
TCGTTTTCAGTGAATCCAGAAAACGGAAAAAAAGAAAAAATGGATCCAGT
GAACGAGTGGGGCAACTCATCTCTTGAAACCGTGGACCCAGAAATTCACT
ACCTGATCGAGAAAGAGAAGCGCCGACAATGCCGCGCCATCGAGCTCATC
GCCTCCGAGAACTTCACCTCCTTCGCCGTTATCGAAGCCCTCGGCAGCGC
CCTCACCAACAAATACTCAGAGGGAATGCCCGGCAACCGTTACTACGGAG
GCAACGAATTCATCGACGAGATCGAGAATCTCTGCCGGTCGAGAGCTTTA
CAAACTTTCCATTTGGACCCCACCCAGTGGGGTGTCAACGTTCAGCCTTA
CTCCGGCTCGCCGGCCAACTTCGCCGCTTACACGGCGGTGCTCGAGCCTC
ATGACCGTATCATGGGGCTGGACTTGCCGTCCGGAGGGCATTTGACTCAT
GGGTATTACACTTCTGGCGGGAAAAGATATCGGGCGACTTCCATTTACTT
CGAGAGCTTGGCGCACCAGGTGAATCCGAGTACTGGGTATATTGATTACA
TCATTGGAGGAGAAGCGTTGGATTTTAGGCCGAATCTGACCGTTTGGCGT
GGAAATGATTTCGAGGGGAGTGACGATATGTATGAATTGGGGTGGTGGCG
GGACGGGGGGCGCGTGGTGGGCGTGGAGAGGGAGGGCGGCGAGGGCGGGG
GGGGCGTGGTGAGGGTCGG
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