EY709050

Overview
NameEY709050
Unique NameEY709050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 47/141 (33.33%), Postives = 70/141 (49.65%), Query Frame = 2 
Query:   11 PQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA-PLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430
            P ++  E  R  + D    P    N   L   +   V+S +G   +  +   +D   +E     + H  V S   +  DE    +S  +VEK   +  Y D+GG  AQ+ +I+E VELPL H +LY  IG+KPPKG++LYG
Sbjct:  118 PIKDTVENIRGNIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFK-VTKMIDAQDME-----IKHGSVTSTTSVYCDET---ISREEVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYG 249
[Close]
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 2 
Query:  179 QLEPGCAILMHNKV-LSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430
            +L PG ++L+  K   +   + + EV+ +V    +E+ P  SY DIGGL  QI +I++AVELP  H ELY +  ++PPKGV+LYG
Sbjct:  213 KLRPGDSLLVDPKAGYAFERVPKAEVEDLV----LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLYG 293
The following BLAST results are available for this feature:
BLAST of EY709050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CDC48_ENCCU5.273e-1133.33Cell division control protein 48 OS=Encephalitozoo... [more]
MPA_MYCLE8.994e-1143.53Proteasome-associated ATPase OS=Mycobacterium lepr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-F09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709050 ID=EY709050; Name=EY709050; organism=Citrus sinensis; type=EST; length=858bp
GAGATTGAAGCCGCAGGAAGAGAAGGCGGAGGAAGATCGGTCAAAGGTTG
ACGATCTGAGAGGTTCGCCGATGAGCGTTGGTAATTTGGAGGAGCTGATT
GATGAGAATCACGCCATTGTTTCGTCGTCGGTGGGGCCCGAGTATTACGT
CGGGATTTTGTCCTTTGTTGATAAGGATCAGCTGGAGCCTGGCTGTGCTA
TTTTGATGCACAATAAGGTTCTTTCGGTCGTTGGGCTTCTGCAAGATGAA
GTAGATCCAATGGTGTCTGTGATGAAGGTTGAGAAGGCTCCATTGGAGTC
TTATGCTGATATTGGAGGGTTAGATGCACAGATACGGGAGATTAAAGAAG
CTGTTGAGCTTCCTCTTAACCATCCTGAACTTTATGAAGATATCGGTATC
AAGCCTCCTAAGGGAGTTATATTGTATGGAGAGCTGGAACAGGCAGACAC
TGGTTGCAAAAGTGGTGAAAATTAACATCTGCAAATTTGTTGCGTGTTAT
CGGGATGGAACAGTTCGAAGGACCCGGGGGGAGGGCGGGGGTTATTGAGA
AATTTTTCAAAAGGGCTGGCGGTTTTCTCCTTTATCGCTGGGGGGGGGGC
TCCGCCCCGTGGGACCAAGAGACTATCCCCCCTCCCCGGGTGTCCTTGGA
GGTATACTCGCTTGGAGGGGGAACGGGGAGGGGGGAGGGCGGGAGGGGCG
CTGGGGGAGAAGGGCGGGTGCGGCGTGGGTGTTCGGGTGTGGTTGGTTGC
TGCCGGTGGGGGGAGCGGGGGGCGGGGGGGTCGGAGCAGTGGGGCGGGGG
GGGGGGGCGGCGGGGCCGGGCGGCGCGGGGGCGGGGGGGGGGGCGCGGGG
GAGGAGGG
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