FC922568

Overview
NameFC922568
Unique NameFC922568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.615e-64
Identity = 118/239 (49.37%), Postives = 157/239 (65.69%), Query Frame = 2
Query:   74 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            +   GWAA+D +G LSP+ ++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG C  C  C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D
Sbjct:    8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLD 246          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.343e-63
Identity = 116/239 (48.54%), Postives = 158/239 (66.11%), Query Frame = 2
Query:   74 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            +   GWAA+D +G L+P+ ++ R+TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG C  C  C  ++E YC K I +Y + Y DG  T GG++  MV D+ FV++IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D
Sbjct:    8 RKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLD 246          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 5.220e-63
Identity = 111/237 (46.84%), Postives = 159/237 (67.09%), Query Frame = 2
Query:   77 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 787
            N   WAA+D SG+LSP+ F+RR    +DV+ ++THCG+C++D+   +N + ++IYP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SC  C++C   LEN+C K ++TY +   DGT+T GGYS  ++  + +  +IP   PL   APLLCAGITVY+P+  + +++PG                KF KA G+KVTV STS SK+ EAI  LGAD+F++S D+++M++   ++
Sbjct:    9 NCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSL 245          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.817e-63
Identity = 117/239 (48.95%), Postives = 156/239 (65.27%), Query Frame = 2
Query:   74 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            K   GWAA+D SG L+P++++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+  GD VGVG +VG C  C  C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVIS+S  K+ EA++ LGAD++LVS D   M AA  ++D
Sbjct:    8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLD 246          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.984e-62
Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 2
Query:   65 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG C SC  C  D E YC K I  Y + Y DG  T GG++  +V  + FVV+IP+G   +  A ++CAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLD 245          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.871e-58
Identity = 107/234 (45.73%), Postives = 151/234 (64.53%), Query Frame = 2
Query:   89 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            WAA+D SG+LSP   +RR+    DV+  +THCG+C++D+   +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD VGVG  V SC  C+ C    E  C K + T+    HDG++T GGYS  +V  E +  +IP   PL++ APLLCAGITVY+P+  + +++PG                KF KA G+ VTV STS SKK EA+  LGA++F++S D D+M+A   ++D
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLD 247          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.068e-50
Identity = 105/235 (44.68%), Postives = 135/235 (57.45%), Query Frame = 2
Query:   89 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAG-ANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFD 239          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.068e-50
Identity = 105/235 (44.68%), Postives = 135/235 (57.45%), Query Frame = 2
Query:   89 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAG-ANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFD 239          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.557e-49
Identity = 102/219 (46.58%), Postives = 131/219 (59.82%), Query Frame = 2
Query:  137 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            RR     DV   +   GICHSD+H   +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+VGVGC V SC  C+ C    E +C K V+ TY +  +DG  TYGGYS  +V  + FVVRIP+   +D  +PLLCAGIT YSPL+ + +  PG                +FA AMG +VTV+S S +KK EA+E LGA+ +  + D     A  G  D
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFD 242          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.849e-47
Identity = 103/227 (45.37%), Postives = 130/227 (57.27%), Query Frame = 2
Query:  116 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPE-GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 790
            L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC  C+ C   LENYC  +  TY +   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +    PG                K A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFD 239          
The following BLAST results are available for this feature:
BLAST of FC922568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
CADH_MAIZE3.615e-6449.37Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_SACOF2.343e-6348.54Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH4_ORYSJ5.220e-6346.84Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_ORYSJ6.817e-6348.95Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_EUCBO1.984e-6249.17Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH3.871e-5845.73Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU5.068e-5044.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO5.068e-5044.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU9.557e-4946.58Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI6.849e-4745.37Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1AA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922568 ID=FC922568; Name=FC922568; organism=Citrus sinensis; type=EST; length=791bp
AAACTAAGCCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGC
AAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAG
GACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGG
AGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCAG
ATCTTCACATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTC
CCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAG
TAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCAT
GCCACTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAA
GTTATAATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGG
AGGCTACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTC
CTGAAGGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATC
ACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCA
TGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCG
CAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAG
AAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCG
TGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATG
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