FC922568

Overview
NameFC922568
Unique NameFC922568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.096e-23
Identity = 68/208 (32.69%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  149 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 769
            G   V  K    G+CH+DLH  K +W      P +PGHE VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C        ++ + G    G ++   +AD  FV R+P        AP+LCAG+TVY  L+   + +PG                ++AKAMG+ V      P K + A E+LGAD  + +R  D ++
Sbjct:   26 GPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC-------GSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVE 224          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.043e-23
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  158 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM-XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 772
            ++   V + G+CH+DLH  K +W   +  P+V GHE  G+V   G  V  F++GD  G+  + GSC SC+ C    E+ C +  +  +   HDG+     +     AD     +IP+GT L   AP+LCAG+TVY  L+   L KPG                 ++AKAMG++V  I     K+ E  ++ G + F+  R   +M A
Sbjct:   60 EILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADL--SGYTHDGS-----FQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADL-KPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKE-ELFKQCGGEVFIDFRKSKDMVA 257          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.043e-23
Identity = 59/199 (29.65%), Postives = 96/199 (48.24%), Query Frame = 2
Query:  149 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 742
            G   +  K+ + G+CH+DLH +   W   +  P+V GHE  G+V   G  V +F++GD+ G+  + GSC  C+ C    +  C +  ++       G    G +    +       +IP G PLDA AP+LCAGITVY  L+  G+                    ++AKAMG++V  +     K++   E LG ++++
Sbjct:   30 GPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLS-------GYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRA-MCESLGTETYV 220          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.897e-23
Identity = 61/196 (31.12%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  158 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 742
            ++   V + G+CH+DLH  + +W  +T  P+V GHE  G+V  +G  V+ +++GD  G+  + GSC SC+ C +  E  CPK  +  +   HDG+     +     AD     RIP+   L   AP+LCAG+TVY  L+   +                    ++AKAMG +V  I     +K++  + LG + F+
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADL--SGYTHDGS-----FQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALKSAHIKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAG-DEKAKLFKELGGEYFI 220          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 1.536e-22
Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2
Query:  158 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMD 790
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP+GT L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I     K+ E    +G + F+  ++++D + A +   D
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATD 237          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.007e-22
Identity = 71/242 (29.34%), Postives = 112/242 (46.28%), Query Frame = 2
Query:   56 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 778
            P Q  P+        +T G L     +       ++   V + G+CHSDLH    +W   + +P++ GHE  GVV ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T     HDGT     + +   AD      IP    L   AP+LCAGITVY  L+   +                    ++A AMG +V  I    +K+ +  E+LG + F+   ++ ++  A+
Sbjct:    2 PSQVIPEKQKAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGT--GFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKR-KLFEQLGGEIFIDFTEEKDIVGAI 235          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.007e-22
Identity = 71/242 (29.34%), Postives = 112/242 (46.28%), Query Frame = 2
Query:   56 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 778
            P Q  P+        +T G L     +       ++   V + G+CHSDLH    +W   + +P++ GHE  GVV ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T     HDGT     + +   AD      IP    L   AP+LCAGITVY  L+   +                    ++A AMG +V  I    +K+ +  E+LG + F+   ++ ++  A+
Sbjct:    2 PSQVIPEKQKAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGT--GFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKR-KLFEQLGGEIFIDFTEEKDIVGAI 235          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.470e-22
Identity = 62/196 (31.63%), Postives = 96/196 (48.98%), Query Frame = 2
Query:  158 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 742
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV ++GS V  +KVGD  G+  + GSC +C+ C    E+ CP   +  +   HDG+     +     AD     +I +GT L   AP+LCAG+TVY  L+   L                    ++A AMG +V  I     +K +  ++LG + F+
Sbjct:   60 EILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNCPDADL--SGYTHDGS-----FQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVYKALKEADLKAGDWVAISGAAGGLGSLAVQYATAMGYRVLGIDAG-EEKEKLFKKLGGEVFI 247          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.784e-21
Identity = 59/201 (29.35%), Postives = 100/201 (49.75%), Query Frame = 2
Query:  170 KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 769
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   KVGD+V +  M  +C +C+ C    E  C  V+       + G    G  ++ ++ D ++ V++PE     A + + CAG+T Y  ++  G++ PG                ++AK  MG KV     +  K + A E LGAD+ + S + D ++
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIE-PGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIE 220          
BLAST of FC922568 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.101e-20
Identity = 62/204 (30.39%), Postives = 94/204 (46.08%), Query Frame = 2
Query:  149 GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG----HEIVGVVTEVGS--KVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 742
            G+ +V   +TH G+CHSD  ++ N W    +P  PG    HE VG V ++G+  + S  K+GD+VGV  +  +C  C  C    +  C        N+   G  T G +   ++    +V  IP+G P    APLLCAG+TVY+ L+     +PG                    A G+ + VI      K E ++  GA+ F+
Sbjct:   34 GDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLC-------FNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK-RSKAQPGQWIVISGAGGGLGHLAVQIAAKGMGLRVIGVDHGSKEELVKASGAEHFV 229          
The following BLAST results are available for this feature:
BLAST of FC922568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
ADHA_RHIME3.096e-2332.69Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH4_KLULA4.043e-2332.85Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH1_EMENI4.043e-2329.65Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH1_KLUMA6.897e-2331.12Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH1_YEAST1.536e-2230.99Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH5_YEAST2.007e-2229.34Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS2.007e-2229.34Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH3_YEAST4.470e-2231.63Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH_STAEQ3.784e-2129.35Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH2_EMENI1.101e-2030.39Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1AA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922568 ID=FC922568; Name=FC922568; organism=Citrus sinensis; type=EST; length=791bp
AAACTAAGCCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGC
AAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAG
GACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGG
AGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCAG
ATCTTCACATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTC
CCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAG
TAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCAT
GCCACTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAA
GTTATAATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGG
AGGCTACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTC
CTGAAGGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATC
ACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCA
TGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCG
CAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAG
AAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCG
TGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATG
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