EY744940

Overview
NameEY744940
Unique NameEY744940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTP7 (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ribBA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.184e-45
Identity = 89/142 (62.68%), Postives = 108/142 (76.06%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVP 435
            +EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE  GRGV++YLR  EGRGIGL +KLRAY LQD G DTVEAN  LG   D REY IGAQM + LGV++++L+TNNP+K  GLK  GL +  + P
Sbjct:  235 KEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREP 375          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTP2 (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ribBA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.184e-45
Identity = 89/142 (62.68%), Postives = 108/142 (76.06%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVP 435
            +EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE  GRGV++YLR  EGRGIGL +KLRAY LQD G DTVEAN  LG   D REY IGAQM + LGV++++L+TNNP+K  GLK  GL +  + P
Sbjct:  235 KEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREP 375          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACA2 (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens (strain FZB42) GN=ribBA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.547e-45
Identity = 93/155 (60.00%), Postives = 115/155 (74.19%), Query Frame = 1
Query:   10 REHIAMVKGDIG-DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A V GD+  + + +LVRVHSECLTGD+F S RCDCG QL  A+ QI   GRGVL+YLR  EGRGIGL +KL+AY LQ+ G DTVEANE LG   D R YGIGAQ+LRDLGV+ MKL+TNNP K  GL+GYGL+++ +VP      + N+ Y
Sbjct:  231 KEHLAFVMGDVPFNSEPVLVRVHSECLTGDVFASHRCDCGPQLHAALAQIAEEGRGVLLYLR-QEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVQHMKLLTNNPRKIAGLEGYGLSISERVPLQMEASEHNKQY 384          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAM (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens GN=ribBA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.020e-45
Identity = 93/155 (60.00%), Postives = 115/155 (74.19%), Query Frame = 1
Query:   10 REHIAMVKGDIG-DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A V GD+  +   +LVRVHSECLTGD+F S RCDCG QL  A++QI   GRGVL+YLR  EGRGIGL +KL+AY LQ+ G DTVEANE LG   D R YGIGAQ+LRDLGV+ MKL+TNNP K  GL+GYGL+++ +VP      + N+ Y
Sbjct:  231 KEHLAFVMGDVPFNSGPVLVRVHSECLTGDVFASHRCDCGPQLHAALRQIAEEGRGVLLYLR-QEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVQHMKLLTNNPRKIAGLEGYGLSISDRVPLQMEASEHNKQY 384          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACV8 (Riboflavin biosynthesis protein ribBA OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ribBA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.639e-45
Identity = 90/159 (56.60%), Postives = 113/159 (71.07%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EHIA++KGDI +G+ +LVRVHS C TGDIFGS RCDCG+QL  A+Q IE  G+G +VYL   EGRGIGL  K++AY LQ++G DTVEAN  LG   D R+YG+GAQ+LR +GV  M+L+TNNP K VGL+ YGL++   VP     +K N  Y     D
Sbjct:  237 EHIAIIKGDIKEGEPVLVRVHSSCATGDIFGSMRCDCGEQLHKALQMIEKEGKGAVVYLN-QEGRGIGLMEKMKAYKLQENGVDTVEANILLGHQADERDYGVGAQILRSIGVTQMRLLTNNPVKRVGLESYGLSIVENVPIEITPNKYNERYLKTKKD 394          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_BURMA (GTP cyclohydrolase-2 OS=Burkholderia mallei GN=ribA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.878e-45
Identity = 86/153 (56.21%), Postives = 114/153 (74.51%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EH+A+V GD+ +   +L R+HSECLTGD+FGS RCDCG+QL L+++ I A GRGVL+YLRGHEGRGIGL +K+RAY LQ+ GRDTVEAN +LGLP D+REY   A +LR L V +++LM+NNP K+  L  +G+ V  +V    P+ + N  Y
Sbjct:   29 EHLALVMGDVAEQPSVLTRLHSECLTGDVFGSYRCDCGEQLDLSLRYIAAEGRGVLLYLRGHEGRGIGLSNKIRAYALQEQGRDTVEANLDLGLPDDAREYDSAAAILRILKVTSVRLMSNNPKKFDTLARHGIPVCERVALAVPVREENERY 181          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFR (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis GN=ribBA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.499e-44
Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EHIA++KG     + ILVRVHS C+TGDIFGS RC+CG+QL  AM+ IEAAG+GV+VY+   EGRGIGL +K+ AY LQ++G DTV+AN  LG   D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL +   V      +  N  Y     D
Sbjct:  237 EHIALIKGTWDTDEPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYMN-QEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKD 394          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFN (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ribBA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.499e-44
Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EHIA++KG     + ILVRVHS C+TGDIFGS RC+CG+QL  AM+ IEAAG+GV+VY+   EGRGIGL +K+ AY LQ++G DTV+AN  LG   D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL +   V      +  N  Y     D
Sbjct:  237 EHIALIKGTWDTDEPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYMN-QEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKD 394          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_STRCO (GTP cyclohydrolase-2 OS=Streptomyces coelicolor GN=ribA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.499e-44
Identity = 89/153 (58.17%), Postives = 116/153 (75.82%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            E +A+V GD+G  +D+L R+HSECLTGD FGS  C+CG QLA A++Q+  AG G++VYLRGHEGRGIGL  KLRA  LQ +G DTVEAN  LGLPVD+R+YG+ A++L DLGVR+++LM+NNP K   L  +G+ VA +VP   P  ++N TY
Sbjct:   46 EQVALVHGDLG-AEDVLTRLHSECLTGDAFGSQHCECGAQLASALRQVADAGSGIVVYLRGHEGRGIGLLAKLRAMALQAEGLDTVEANLALGLPVDARDYGVAARILDDLGVRSVRLMSNNPRKREALVRHGIRVAEQVPLLIPPCESNITY 197          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.109e-43
Identity = 83/163 (50.92%), Postives = 114/163 (69.94%), Query Frame = 1
Query:   10 REHIAMVKG---DIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            +EH+A++ G   ++   +D+ VRVHSECLTGD+F S RCDCG QL  +M+ I+ AG+G+++YLRGHEGRGIGL  KL+AY+LQD G DTV+AN E GLP D+REY +  Q+LRDLG+++  L+TNNP K  GL+G+G+  +   P     +  N  Y     D
Sbjct:  242 QEHVALIAGGVEELNGAEDVFVRVHSECLTGDVFHSRRCDCGQQLHQSMEIIQEAGQGIIIYLRGHEGRGIGLLAKLKAYSLQDSGLDTVDANLEQGLPEDAREYSVAGQILRDLGIKSANLLTNNPHKGEGLRGFGVEASAHTPVEIEPNADNIDYLRTKRD 404          
The following BLAST results are available for this feature:
BLAST of EY744940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBBA_ACTP71.184e-4562.68Riboflavin biosynthesis protein ribBA OS=Actinobac... [more]
RIBBA_ACTP21.184e-4562.68Riboflavin biosynthesis protein ribBA OS=Actinobac... [more]
RIBBA_BACA21.547e-4560.00Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAM2.020e-4560.00Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACV82.639e-4556.60Riboflavin biosynthesis protein ribBA OS=Bacteroid... [more]
RIBA_BURMA5.878e-4556.21GTP cyclohydrolase-2 OS=Burkholderia mallei GN=rib... [more]
RIBBA_BACFR6.499e-4454.72Riboflavin biosynthesis protein ribBA OS=Bacteroid... [more]
RIBBA_BACFN6.499e-4454.72Riboflavin biosynthesis protein ribBA OS=Bacteroid... [more]
RIBA_STRCO6.499e-4458.17GTP cyclohydrolase-2 OS=Streptomyces coelicolor GN... [more]
RIBBA_CORAM1.109e-4350.92Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-B11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744940 ID=EY744940; Name=EY744940; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGTGAGCATATAGCAATGGTTAAGGGTGACATTGGGGATGG
ACAAGATATTCTTGTGAGAGTGCACTCAGAGTGTCTCACTGGAGATATAT
TTGGATCAGCCAGATGTGATTGTGGTGATCAGCTTGCACTTGCAATGCAG
CAGATTGAGGCTGCTGGCAGGGGTGTATTAGTTTATCTCCGTGGTCATGA
GGGAAGGGGCATTGGTTTAGGCCACAAGCTTCGCGCTTATAACTTGCAGG
ACGATGGGCGTGATACAGTTGAAGCAAATGAGGAATTGGGATTGCCTGTT
GACTCACGGGAATATGGCATTGGTGCACAGATGCTAAGGGATCTTGGTGT
TCGAACAATGAAGCTGATGACAAACAACCCTTCCAAGTATGTTGGACTCA
AGGGTTATGGTTTGGCTGTGGCAGGAAAGGTTCCCCCAAACACTCCCCTT
CACAAGGCAAACAGGACATATGCCCACCCCAGCCCTGATCCATGCGCCAC
TTCATGCGTTCAGAATCCCCGGGGCCGCGTAGCACCATCCTCCAAGCCAG
GCAACGACAAAAAGAAGAACAAAGCCTCAAAGAGCACGCCTACGACAAAA
AAACAGGAATCATCGATGAGGTCAAGCTCAGCAACCAACACCCATAACCA
CCAAGAACCCAACAAACCCGGCCAGCCGCAGCCCCGCCCAACAACCCTAC
ACCATGCCCCTACCCACCCGACCACACGCGCGAGACCCCCAACGGCCATC
ACACCATCCAGCCCAGCGTCAGCCAACCCACACGAGGCCAGCTACGGAGC
CCCCCATACCACTCCCCACACCCACCAGACAAAGTAGCCGCAAAACACCA
TGTAACACACACGGCCTAGGCAACCAAGGCCAC
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