EY744940

Overview
NameEY744940
Unique NameEY744940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_ACTSZ (GTP cyclohydrolase-2 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=ribA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.295e-39
Identity = 79/154 (51.30%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GD+ DGQ +L R+HSECLTGD   S +CDCG QLA A++QI   GRGVL+Y R  EGRGIGL +K+RAY LQD G DT+EAN  LG   D R + + A +   LGV+ ++L+TNNP+K   +K  G+ V  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDVEDGQPVLARIHSECLTGDALHSLKCDCGFQLARALRQISEEGRGVLIYHR-EEGRGIGLINKIRAYALQDQGMDTIEANLALGFKADERNFSVCADIFEQLGVKAVRLLTNNPAKIETMKSAGINVVERVPLNVGENRYNVGY 183          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_AERHH (GTP cyclohydrolase-2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ribA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.080e-38
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            ++H A+V GDI   + +L R+HSECLTGD   S RCDCG QL  A++ I  AGRGVL+Y+R  EGRGIGL +K+RAY+LQD G DTVEAN  LG   D R+Y I A ML+ L V+++KLMTNNP K   ++ +G+ VA +VP     +  N  Y
Sbjct:   31 KDHAALVMGDITGDEPVLGRIHSECLTGDALFSLRCDCGFQLQAALENIAKAGRGVLLYVR-QEGRGIGLLNKIRAYHLQDQGADTVEANVALGFAADMRDYTICADMLKQLEVKSLKLMTNNPRKMKAMESFGIPVAERVPLQEGRNPHNEFY 183          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_HAES2 (GTP cyclohydrolase-2 OS=Haemophilus somnus (strain 2336) GN=ribA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.960e-38
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GDI D + +L R+HSECLTGD   S +CDCG QLA A++QI  AGRGVL+Y R  EGRGIGL +K+RAY LQD G DT+EAN  LG   D R + + A +   LGV+ ++L+TNNP+K   +K  G+ +  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDINDDKPVLARIHSECLTGDALHSLKCDCGFQLATALRQISEAGRGVLIYHR-EEGRGIGLINKIRAYALQDQGLDTIEANLALGFAADERNFSVCADIFALLGVKQVRLLTNNPNKIETMKKSGINIVERVPLNVGENRYNTEY 183          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_HAES1 (GTP cyclohydrolase-2 OS=Haemophilus somnus (strain 129Pt) GN=ribA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.960e-38
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GDI D + +L R+HSECLTGD   S +CDCG QLA A++QI  AGRGVL+Y R  EGRGIGL +K+RAY LQD G DT+EAN  LG   D R + + A +   LGV+ ++L+TNNP+K   +K  G+ +  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDINDDKPVLARIHSECLTGDALHSLKCDCGFQLATALRQISEAGRGVLIYHR-EEGRGIGLINKIRAYALQDQGLDTIEANLALGFAADERNFSVCADIFALLGVKQVRLLTNNPNKIETMKKSGINIVERVPLNVGENRYNTEY 183          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_SACD2 (GTP cyclohydrolase-2 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ribA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.551e-37
Identity = 78/154 (50.65%), Postives = 97/154 (62.99%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+ +  GD+   + +LVR+HSECLTGD   S RCDCG QL  AM +I   GRG + YLR  EGRGIGL +K+RAY LQD G DTVEANE LG   D R+Y I   M   LG+  +KLMTNNP K   L  YG+ +  ++P  T  +  N  Y
Sbjct:   30 KEHVVLTMGDVSSEEPVLVRIHSECLTGDALFSLRCDCGAQLQAAMHKIAIEGRGAIFYLR-QEGRGIGLLNKIRAYKLQDCGADTVEANERLGFGADMRDYSILKPMFEHLGIAQVKLMTNNPRKIDALTQYGINIVNRIPHETGRNPHNADY 182          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_SHELP (GTP cyclohydrolase-2 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ribA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.645e-37
Identity = 80/154 (51.95%), Postives = 102/154 (66.23%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+  G++   Q IL R+HSECLTGD   S RCDCG QL  AMQ I  AG+G ++YLR  EGRGIGL +K+RAY LQD G +TVEANE LG   D R+Y +   ML  +GV+ +KLMTNNP K   +K  G+AV  +VP     ++ N  Y
Sbjct:   30 KEHVALTFGELDASQPILGRIHSECLTGDALFSLRCDCGFQLQTAMQNIAEAGQGFILYLR-QEGRGIGLLNKIRAYELQDQGANTVEANERLGFAADMRKYDMIKPMLEKIGVQQVKLMTNNPRKVKAMKELGIAVIERVPLQVGKNRYNEAY 182          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_SHEAM (GTP cyclohydrolase-2 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ribA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.645e-37
Identity = 80/160 (50.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            +EH+A+  GD+     +L R+HSECLTGD   S RCDCG QL  AMQ+I   GRG ++YLR  EGRGIGL +K+RAY LQD G +TVEANE+LG   D R+Y + A ML  LG+  +KLMTNNP K   +K  G+ V  +VP     ++ N  Y     D
Sbjct:   30 KEHVALTFGDLSGDAPVLGRIHSECLTGDALFSLRCDCGFQLQTAMQRIAETGRGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFAADMRKYDMIAPMLAHLGISRVKLMTNNPRKVNAMKDVGMDVVERVPLQVGKNRYNEAYLKTKSD 188          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_HAEIN (GTP cyclohydrolase-2 OS=Haemophilus influenzae GN=ribA PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQD-ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GDI +  + +L R+HSECLTGD   S +CDCG QLA A++QI+  GRGVL+Y R  EGRGIGL +K+RAY+LQD G DT+EAN  LG   D R + + A M   LGV+ ++LMTNNP K   +K  G+ V  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDISNADEPVLARIHSECLTGDALHSLKCDCGFQLATALKQIQEEGRGVLIYHR-EEGRGIGLINKIRAYSLQDKGMDTIEANLALGFKADERNFEVCADMFELLGVKKVRLMTNNPEKVETMKKAGINVVERVPLNVGENRYNTKY 184          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_HAEIG (GTP cyclohydrolase-2 OS=Haemophilus influenzae (strain PittGG) GN=ribA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQD-ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GDI +  + +L R+HSECLTGD   S +CDCG QLA A++QI+  GRGVL+Y R  EGRGIGL +K+RAY+LQD G DT+EAN  LG   D R + + A M   LGV+ ++LMTNNP K   +K  G+ V  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDISNADEPVLARIHSECLTGDALHSLKCDCGFQLATALKQIQEEGRGVLIYHR-EEGRGIGLINKIRAYSLQDKGMDTIEANLALGFKADERNFEVCADMFELLGVKKVRLMTNNPEKVETMKKAGINVVERVPLNVGENRYNTKY 184          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_HAEIE (GTP cyclohydrolase-2 OS=Haemophilus influenzae (strain PittEE) GN=ribA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQD-ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A+V GDI +  + +L R+HSECLTGD   S +CDCG QLA A++QI+  GRGVL+Y R  EGRGIGL +K+RAY+LQD G DT+EAN  LG   D R + + A M   LGV+ ++LMTNNP K   +K  G+ V  +VP N   ++ N  Y
Sbjct:   31 KEHVALVMGDISNADEPVLARIHSECLTGDALHSLKCDCGFQLATALKQIQEEGRGVLIYHR-EEGRGIGLINKIRAYSLQDKGMDTIEANLALGFKADERNFEVCADMFELLGVKKVRLMTNNPEKVETMKKAGINVVERVPLNVGENRYNTKY 184          
The following BLAST results are available for this feature:
BLAST of EY744940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBA_ACTSZ6.295e-3951.30GTP cyclohydrolase-2 OS=Actinobacillus succinogene... [more]
RIBA_AERHH4.080e-3852.60GTP cyclohydrolase-2 OS=Aeromonas hydrophila subsp... [more]
RIBA_HAES26.960e-3850.65GTP cyclohydrolase-2 OS=Haemophilus somnus (strain... [more]
RIBA_HAES16.960e-3850.65GTP cyclohydrolase-2 OS=Haemophilus somnus (strain... [more]
RIBA_SACD21.551e-3750.65GTP cyclohydrolase-2 OS=Saccharophagus degradans (... [more]
RIBA_SHELP2.645e-3751.95GTP cyclohydrolase-2 OS=Shewanella loihica (strain... [more]
RIBA_SHEAM2.645e-3750.00GTP cyclohydrolase-2 OS=Shewanella amazonensis (st... [more]
RIBA_HAEIN5.892e-3750.97GTP cyclohydrolase-2 OS=Haemophilus influenzae GN=... [more]
RIBA_HAEIG5.892e-3750.97GTP cyclohydrolase-2 OS=Haemophilus influenzae (st... [more]
RIBA_HAEIE5.892e-3750.97GTP cyclohydrolase-2 OS=Haemophilus influenzae (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-B11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744940 ID=EY744940; Name=EY744940; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGTGAGCATATAGCAATGGTTAAGGGTGACATTGGGGATGG
ACAAGATATTCTTGTGAGAGTGCACTCAGAGTGTCTCACTGGAGATATAT
TTGGATCAGCCAGATGTGATTGTGGTGATCAGCTTGCACTTGCAATGCAG
CAGATTGAGGCTGCTGGCAGGGGTGTATTAGTTTATCTCCGTGGTCATGA
GGGAAGGGGCATTGGTTTAGGCCACAAGCTTCGCGCTTATAACTTGCAGG
ACGATGGGCGTGATACAGTTGAAGCAAATGAGGAATTGGGATTGCCTGTT
GACTCACGGGAATATGGCATTGGTGCACAGATGCTAAGGGATCTTGGTGT
TCGAACAATGAAGCTGATGACAAACAACCCTTCCAAGTATGTTGGACTCA
AGGGTTATGGTTTGGCTGTGGCAGGAAAGGTTCCCCCAAACACTCCCCTT
CACAAGGCAAACAGGACATATGCCCACCCCAGCCCTGATCCATGCGCCAC
TTCATGCGTTCAGAATCCCCGGGGCCGCGTAGCACCATCCTCCAAGCCAG
GCAACGACAAAAAGAAGAACAAAGCCTCAAAGAGCACGCCTACGACAAAA
AAACAGGAATCATCGATGAGGTCAAGCTCAGCAACCAACACCCATAACCA
CCAAGAACCCAACAAACCCGGCCAGCCGCAGCCCCGCCCAACAACCCTAC
ACCATGCCCCTACCCACCCGACCACACGCGCGAGACCCCCAACGGCCATC
ACACCATCCAGCCCAGCGTCAGCCAACCCACACGAGGCCAGCTACGGAGC
CCCCCATACCACTCCCCACACCCACCAGACAAAGTAGCCGCAAAACACCA
TGTAACACACACGGCCTAGGCAACCAAGGCCAC
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