EY680312

Overview
NameEY680312
Unique NameEY680312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPA (Triosephosphate isomerase OS=Legionella pneumophila (strain Paris) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.892e-34
Identity = 88/245 (35.92%), Postives = 128/245 (52.24%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            R+  V GNWK NG  ++V ++VS + E                         L      V AQN + +  GA+TGE+SA ML +    +V++GHSERR   +E  +FV  K  +    G+  I CVGETL +RE+G T  V+A+Q  A++ K  + + + V+AYEPVWAIGTGK ATP QAQ++H  +R  + +   ++    T I  G   + N       P++  +G LVGG    A+ F  I
Sbjct:    2 RQKIVAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLKTGKVVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGETLSERENGKTEQVIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRDLVGEINDSDAKHLTLIYGGSVNENNAKALFSMPDI--DGGLVGGASLNAKQFVEI 244          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_COREF (Triosephosphate isomerase OS=Corynebacterium efficiens GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.892e-34
Identity = 97/242 (40.08%), Postives = 129/242 (53.31%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            MARK  + GNWK N   ++    V  L  A                       ++L+  D       AQ+    + GA+TGEVSA ML  L+  WV++GHSERR   NE+++ V  K   ALS+G+  I CVGE LE RE+G+ V  V EQT+A    +S     N V+AYEPVWAIGTGKVA+ A AQEV   +R  + +    EVA   RI++G   K   +  I  QP++  +G LVGG
Sbjct:    4 MARKPLIAGNWKMNLDHQQAIGTVQKLAFALHKDYYEKVDVAVIVPFTDLRSVQTLVEGDKLQITYGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNETDELVAAKAKAALSKGISPIVCVGEPLEIREAGTHVDYVVEQTRASLAGLSADELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLVTELAGEEVAEGMRILYGGSVKAETIAEIVSQPDV--DGGLVGG 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPC (Triosephosphate isomerase OS=Legionella pneumophila (strain Corby) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.695e-34
Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            R+  V GNWK NG  ++V ++VS + E                         L      V AQN + +  GA+TGE+SA ML +    +V++GHSERR   +E  +FV  K  +    G+  I CVGETL +RE+G T  ++A+Q  A++ K  + + + V+AYEPVWAIGTGK ATP QAQ++H  +R  + +   ++    T I  G   + N       P++  +G LVGG    A+ F  I
Sbjct:    2 RQKIVAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLRTGRIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGETLSERENGKTEQIIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRDLVGEINDSDAKHLTLIYGGSVNENNAKALFSMPDI--DGGLVGGASLNAKQFVEI 244          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.695e-34
Identity = 89/247 (36.03%), Postives = 132/247 (53.44%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            RK  + GNWK N T EE   + S + N A+                       ++     + AQN + ++ GAFTGE+SA ML ++ + +VI+GHSERR    E+N  + DKV  +L+ GL  + C GETL QRE+G  +  V  Q       +S  ++  VV+AYEP+WAIGTG  A+  QAQE+HA++R+ L     A VA    I++G   K +  + +     + +G L+GG   K+R+F  I
Sbjct:    2 RKKVIAGNWKMNKTLEEGLSLASEVANMAKDEVPADVNLVMCIPYISLAAVSKVINDKVAIGAQNVYQKESGAFTGEISAPMLKSVGVKYVIIGHSERREYFGETNQQLADKVTISLANGLTPLFCCGETLAQREAGIHINFVNAQLTESLFHLSPEDFKKVVIAYEPIWAIGTGVTASDEQAQEMHAKIREHLASKYGAAVADEISILYGGSMKPDNAKGLLACKDI-DGGLIGGASLKSRDFIDI 247          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_MARAV (Triosephosphate isomerase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.005e-33
Identity = 90/251 (35.86%), Postives = 128/251 (51.00%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQVGP 818
            R+  V GNWK NG+ + VK++V  + E                                  AQN    + GA+TGE+SAEM  ++   +V++GHSERR L  E++     KV   L  GL  + CVGETL +RE+    AVVAEQ ++    +++  W  VV+AYEPVWAIGTGK AT   AQ +H+E+RK L D ++A     + +  G     N      +P++  +G L+GG   KA  F  I +  P
Sbjct:    2 RRRIVAGNWKMNGSKDLVKQLVGAVREQSGSVGEDVEVVIIPPAIYLDQVAEQGGGRITTGAQNVSQWQSGAYTGEISAEMARDMGCGYVLVGHSERRQLFGETDSVAAAKVEQVLLSGLVAVLCVGETLAEREADQAEAVVAEQVRSGLSVVADGQWSRVVVAYEPVWAIGTGKTATADDAQAMHSEIRKVL-DGMNAPANEISVLYGGSVKADNAAALFAEPDI--DGGLIGGASLKAEEFISICRSFP 249          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CORGB (Triosephosphate isomerase OS=Corynebacterium glutamicum (strain R) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.005e-33
Identity = 95/242 (39.26%), Postives = 128/242 (52.89%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            MARK  + GNWK N   ++    V+K+   L +                           + +    AQ+    + GA+TGEVSA ML  L+  WV++GHSERR   NES++ V  K   ALS G+  I CVGE LE RE+G+ V  V EQT+     +   +  N V+AYEPVWAIGTGKVA+ A AQEV   +R  + +    EVA   RI++G   K   +  I GQP++  +G LVGG
Sbjct:    1 MARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGDKLEVTFGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDATELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDV--DGGLVGG 240          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBA (Triosephosphate isomerase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.005e-33
Identity = 94/244 (38.52%), Postives = 127/244 (52.05%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKL-QRIGQPNLM*NGFLVGGNFPKARNF 794
            RK  + GNWK N T +E  K+V  L                         K+   S+  VAAQN    + GAFTGEVS  ML  + I +V+LGHSERR   NE+++ +  KV  A +  +  I C GETLEQRESG T   +A Q K     ++    + VV+AYEP+WAIGTGK AT  QA E    +R  + +    EVA   RI +G   K N + +++   ++  +G LVGG   KA +F
Sbjct:    2 RKAIIAGNWKMNKTVDEAVKVVEELKPL-VKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVSPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGETLEQRESGVTNNFIACQIKVDIAGLTKEQAEKVVIAYEPIWAIGTGKTATKEQANETILAIRNVVVEMYGKEVADKVRIQYGGSVKPNTITEQMAMSDI--DGALVGGASLKAEDF 242          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_HAES2 (Triosephosphate isomerase OS=Haemophilus somnus (strain 2336) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.313e-33
Identity = 87/245 (35.51%), Postives = 125/245 (51.02%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            MAR+  V GNWK NG+    K++++ L +                        +L+ SD  +  QN  + K GAFTG++S EML +  + +VI+GHSERR   +ES++F+  K       GL  + C+GE+  + E+G T  V A Q  A+     +  ++  V+AYEP+WAIGTGK ATPAQAQ VHA +R  +     A          G     N  +   QP++  +G LVGG   KA  F
Sbjct:    1 MARRPLVMGNWKLNGSKAFTKELITGLKDELNAVSGCDVAIAPPVMYLAEAEAALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVMNTLGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAKQSQAVAERVIIQYGGSINDANAAELFTQPDI--DGALVGGASLKASAF 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CORGL (Triosephosphate isomerase OS=Corynebacterium glutamicum GN=tpiA PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.313e-33
Identity = 97/242 (40.08%), Postives = 130/242 (53.72%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            MARK  + GNWK N   ++    V+K+   L +                           + +    AQ+    + GA+TGEVSA ML  L+  WV++GHSERR   NES++ V  K   ALS G+  I CVGE LE RE+G+ V  V EQT K++A    +   N V+AYEPVWAIGTGKVA+ A AQEV   +R  + +    EVA   RI++G   K   +  I GQP++  +G LVGG
Sbjct:    1 MARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGDKLEVTFGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDAAELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDV--DGGLVGG 240          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PSYIN (Triosephosphate isomerase OS=Psychromonas ingrahamii (strain 37) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 3
Query:   84 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            V GNWK NGT E V  ++  +  A                        +  +   + AQ+      GAFTGE S  M+      + ++GHSERR   NE++  V  K     + GL  + C+GETLE+RE+  T  VV  Q KA+ +   I   +N V+AYEPVWAIGTGKVA+  QAQ+VHA +R WL +  S  VAA  +I++G   K +  + +  QP++  +G LVGG
Sbjct:    6 VMGNWKLNGTKESVSALIKGIEAAADAAKNVEVAVCPPTIFIEQVANLVANNSIELGAQDVSTNISGAFTGETSPVMVKEFGAKYSLVGHSERRQYHNETDAVVAAKFVAIQANGLVPVLCIGETLEERETDKTFNVVETQLKAVIDVSGIDALENAVIAYEPVWAIGTGKVASSEQAQDVHAHIRTWLAEQ-SKVVAAKVQILYGGSVKASSAKELFAQPDI--DGGLVGG 234          
The following BLAST results are available for this feature:
BLAST of EY680312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_LEGPA5.892e-3435.92Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_COREF5.892e-3440.08Triosephosphate isomerase OS=Corynebacterium effic... [more]
TPIS_LEGPC7.695e-3435.51Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_CYTH37.695e-3436.03Triosephosphate isomerase OS=Cytophaga hutchinsoni... [more]
TPIS_MARAV1.005e-3335.86Triosephosphate isomerase OS=Marinobacter aquaeole... [more]
TPIS_CORGB1.005e-3339.26Triosephosphate isomerase OS=Corynebacterium gluta... [more]
TPIS_CLOBA1.005e-3338.52Triosephosphate isomerase OS=Clostridium botulinum... [more]
TPIS_HAES21.313e-3335.51Triosephosphate isomerase OS=Haemophilus somnus (s... [more]
TPIS_CORGL1.313e-3340.08Triosephosphate isomerase OS=Corynebacterium gluta... [more]
TPIS_PSYIN1.714e-3337.50Triosephosphate isomerase OS=Psychromonas ingraham... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680312 ID=EY680312; Name=EY680312; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAA
AATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAA
ATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATG
AAGCTGAAGTTCCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCG
TTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGT
TGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAG
TTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGT
CATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGA
TAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTG
GAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCT
GAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGT
GTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCC
CTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGAC
AATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCCACGGGAGGTT
CTGTAAATGGAACAAATTGCAAAGAATTGGGCAGCCCAACCTGATGTAAA
ATGGTTTTTTGGTTGGGGGGAACTTCCCTAAAGCCCGGAATTTCTTCCAT
ATTTTTCAAGTCGGCCCCCAATGGAAAAAAAAATTTAAATTAAAAACCAA
ACCACCCCGGGTTTGGCT
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