EY680312

Overview
NameEY680312
Unique NameEY680312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PROVI (Triosephosphate isomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 91/243 (37.45%), Postives = 130/243 (53.50%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            R+  V GNWK N T  E  ++ S +  A                       +++  S+  + AQNC     GAFTGEVS  ML  L   +VI+GHSERR    E++  V  ++   L+ G+K I CVGETLE+RESG+  AVV+ Q     + + +  ++V+AYEPVWAIGTG+ A+  QAQEVH  +R  + +   A  A + RI +G   K  N  +    P++  +G L+GG   KA +F
Sbjct:    2 RRKIVVGNWKMNKTVAESTELASAVVAALGSDCSACEAGIAPTYPALDSVGRTIKGSEVLLVAQNCHYEDDGAFTGEVSTGMLNALGCSYVIIGHSERRQYFGETDATVNLRIKKVLAAGMKAILCVGETLEERESGAFEAVVSTQVTGGLQGVVDISDIVIAYEPVWAIGTGRTASSEQAQEVHKIIRNKVAELYGAPAADAVRIQYGGSVKPSNAAELFAMPDI--DGGLIGGAALKAEDF 242          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PELPB (Triosephosphate isomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 91/243 (37.45%), Postives = 124/243 (51.03%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            R+  V GNWK N + +E V+     L                         K +  S+  + AQNC     GAFTGEVSA M++ +    VI+GHSERR    E+N  V  ++  ALS GL VI CVGETL +RESG    V++ Q +   + I +   +V+AYEPVWAIGTGK A+ AQA+EVH  +R  +        +   RI +G   K  N  +    PN+  +G L+GG    A +F
Sbjct:    2 RRKIVVGNWKMNNSVAESVQLATDVLAALGEGFSGCEVGIAPTYLALDATEKVIAESEVQLVAQNCHYENDGAFTGEVSARMILAVGCSSVIIGHSERRQYFGETNATVNLRIKKALSEGLNVILCVGETLAERESGVMETVISSQVREGLDGIIDISAIVIAYEPVWAIGTGKTASSAQAEEVHLFIRTLVTGLYGQTASEKVRIQYGGSVKPSNAAELFAMPNI--DGGLIGGASLNADDF 242          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PELLD (Triosephosphate isomerase OS=Pelodictyon luteolum (strain DSM 273) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 91/250 (36.40%), Postives = 133/250 (53.20%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGGNFPKARNFFHIFQVG 815
            R+  V GNWK N T  E   + + +  A                       ++L  S   + AQNC     GA+TGEVS  ML  +   +VI+GHSERR    E+++ V  ++   L+ G+KVI CVGETL +RE G T  VV+ Q     + +++  ++V+AYEPVWAIGTGK A+  QAQEVH  +R  +K    AEV+ + RI +G   K +  + +   P++  +G L+GG    A +F  I + G
Sbjct:    2 RRKIVVGNWKMNKTVAESTALATAVIAALGDGCSACEAGIAPTYPALDAVGRALEGSGIALVAQNCHYEDDGAYTGEVSTGMLKAVGCSYVIIGHSERRQYFGETDETVNLRIKKVLASGMKVILCVGETLAEREEGVTGTVVSRQVTEGLKGVADITDLVIAYEPVWAIGTGKTASSDQAQEVHRLIRDTVKGMYGAEVSEAVRIQYGGSVKASNAEELFAMPDI--DGGLIGGASLNAADFAAIVKAG 249          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPL (Triosephosphate isomerase OS=Legionella pneumophila (strain Lens) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 86/245 (35.10%), Postives = 128/245 (52.24%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            R+  V GNWK NG  ++V ++VS + +                         L      V AQN + +  GA+TGE+SA ML +    +V++GHSERR   +E  +FV  K  +    G+  + CVGETL +RE+G T  V+A+Q  A++ K  + + + V+AYEPVWAIGTGK ATP QAQ++H  +R  + +   ++    T I  G   + N       P++  +G LVGG    A+ F  I
Sbjct:    2 RQKIVAGNWKMNGQIQQVTELVSQIEKLIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQVIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIRDLVGEINDSDAKHLTLIYGGSVNENNAKALFSMPDI--DGGLVGGASLNAKQFVEI 244          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_HAES1 (Triosephosphate isomerase OS=Haemophilus somnus (strain 129Pt) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 87/245 (35.51%), Postives = 125/245 (51.02%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            MAR+  V GNWK NG+    K++++ L +                        +L+ SD  +  QN  + K GAFTG++S EML +  + +VI+GHSERR   +ES++F+  K       GL  + C+GE+  + E+G T  V A Q  A+     +  ++  V+AYEP+WAIGTGK ATPAQAQ VHA +R  +     A          G     N  +   QP++  +G LVGG   KA  F
Sbjct:    1 MARRPLVMGNWKLNGSKAFTKELITGLKDELNAVSGCDVAIAPPVMYLAEAETALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVMNTLGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAKQSQAVAERVIIQYGGSVNDANAAELFTQPDI--DGALVGGASLKASAF 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 95/246 (38.62%), Postives = 126/246 (51.22%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            M+RK    GNWK N T +E  + V  L +                       ++   S+  VAAQN    + GAFTGEVS  ML  L + +VI+GHSERR    E+++ V  KV  A   GLK I CVGE+L QRE G T  +V  Q K     +S       V+AYEP+WAIGTGK AT  QA+EV   +R+ +K+    +VA + RI +G      N  +    PN+  +G LVGG   K  +F
Sbjct:    1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGSVNAANAAELFNMPNI--DGGLVGGASLKLDDF 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPN (Triosephosphate isomerase OS=Chlamydia pneumoniae GN=tpiA PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 85/249 (34.14%), Postives = 127/249 (51.00%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            M R+ +V GNWK + T +E K+ V TL                           ++ +      + AQN      GAFTGE+S  ML  + + +V++GHSERR +  ES+ F+  KV      GL  + CVGE+LE RE G    V+ +Q     E++ N    ++AYEPVWAIGTGKVA  +  Q++H   R+ + +  S   A    I++G   K +  QR GQ + + +G LVGG   + ++FF +
Sbjct:    1 MTRQSYVLGNWKMHKTIQEAKEYVQTLASLLQGEPLSCTIGIASPFTSLRAIHEMINTTGAFLWLGAQNVHPELSGAFTGEISLPMLKEVGVEFVLVGHSERRHIFGESDAFIASKVKSVAQAGLVPVLCVGESLEVREEGKAHQVIKKQLLLGLEQMDNGSEFLIAYEPVWAIGTGKVAEASDVQDIHMFCREVVAERFSEATAEEISILYGGSVKVDNAQRFGQCSDV-DGLLVGGASLEGQSFFEV 248          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBB (Triosephosphate isomerase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=tpiA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 93/244 (38.11%), Postives = 127/244 (52.05%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKL-QRIGQPNLM*NGFLVGGNFPKARNF 794
            RK  + GNWK N T +E  K+V  L                         K+   S+  VAAQN    + GAFTGEV+  ML  + I +V+LGHSERR   NE+++ +  KV  A +  +  I C GETLEQRESG T   +A Q K     ++    + VV+AYEP+WAIGTGK AT  QA E    +R  + +    EVA   RI +G   K N + +++   ++  +G LVGG   KA +F
Sbjct:    2 RKAIIAGNWKMNKTVDEAVKVVEELKPL-VKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGETLEQRESGVTNNFIACQIKVDIAGLTKEQAEKVVIAYEPIWAIGTGKTATKEQANETILAIRNVVVEMYGKEVADKVRIQYGGSVKPNTITEQMAMSDI--DGALVGGASLKAEDF 242          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 95/247 (38.46%), Postives = 129/247 (52.23%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNFFHI 803
            R+  V GNWK NG S  V ++++ +  A                      + L  +   + AQN      GAFTGE+SA ML        I+GHSERR L  ESN+ V  +   A+   LK I CVGETLEQRE G T+AV+  Q   + E   + + ++ V+AYEPVWA+GTG+ AT  QAQEVH  +R  L    + EVA + +II+G   K  N  +    P++  +G L+GG    AR F  I
Sbjct:    2 RRPLVVGNWKMNGRSASVARLLNDIL-AGIGDCKAEVGVCVPFVYIPQASEILKGTKVMLGAQNVADHNSGAFTGEISAGMLREFGCELAIVGHSERRLLYGESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFAMPDI--DGGLIGGASLDARAFLSI 244          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBP (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tpiA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 97/252 (38.49%), Postives = 140/252 (55.56%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL-KDNVSAE-VAASTRIIHGRFCKWNKLQR-IGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            RK  + GNWK N T  E K+I   L  A                       S+ R S   V AQN +     A TGE+S   L  L I  V++GHSERR  L E+++F   K++Y L  GL+V+ CVGET  +RE G+T +V+ +Q     + I++  + N+V+AYEPVWAIGTGKVATP +A+E HA +RK + K  V A+ VA + +I++G   K + ++  + +PN+  +G LVGG   K   F  + +
Sbjct:    2 RKKIIAGNWKMNLTLAEAKEITKGLLSA--CDSSSYEIMVFPSALHLESVASIARDSQLIVGAQNAYQSGLTAMTGEISPVQLAELGIQTVLVGHSERRQFLGETSEFDNTKISYFLKHGLRVVYCVGETWAEREKGNTFSVLEDQIGKGLKGITSDLFKNLVIAYEPVWAIGTGKVATPVEAEEAHAFIRKEIGKLFVGADLVAENIQILYGGSVKPDNIKELLAKPNI--DGGLVGGASQKLDLFLGLLK 249          
The following BLAST results are available for this feature:
BLAST of EY680312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_PROVI1.714e-3337.45Triosephosphate isomerase OS=Prosthecochloris vibr... [more]
TPIS_PELPB1.714e-3337.45Triosephosphate isomerase OS=Pelodictyon phaeoclat... [more]
TPIS_PELLD1.714e-3336.40Triosephosphate isomerase OS=Pelodictyon luteolum ... [more]
TPIS_LEGPL1.714e-3335.10Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_HAES11.714e-3335.51Triosephosphate isomerase OS=Haemophilus somnus (s... [more]
TPIS_CLOTH1.714e-3338.62Triosephosphate isomerase OS=Clostridium thermocel... [more]
TPIS_CHLPN1.714e-3334.14Triosephosphate isomerase OS=Chlamydia pneumoniae ... [more]
TPIS_CLOBB2.239e-3338.11Triosephosphate isomerase OS=Clostridium botulinum... [more]
TPIS_METCA2.924e-3338.46Triosephosphate isomerase OS=Methylococcus capsula... [more]
TPIS_LEPBP2.924e-3338.49Triosephosphate isomerase OS=Leptospira biflexa se... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680312 ID=EY680312; Name=EY680312; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAA
AATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAA
ATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATG
AAGCTGAAGTTCCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCG
TTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGT
TGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAG
TTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGT
CATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGA
TAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTG
GAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCT
GAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGT
GTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCC
CTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGAC
AATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCCACGGGAGGTT
CTGTAAATGGAACAAATTGCAAAGAATTGGGCAGCCCAACCTGATGTAAA
ATGGTTTTTTGGTTGGGGGGAACTTCCCTAAAGCCCGGAATTTCTTCCAT
ATTTTTCAAGTCGGCCCCCAATGGAAAAAAAAATTTAAATTAAAAACCAA
ACCACCCCGGGTTTGGCT
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