EY680301

Overview
NameEY680301
Unique NameEY680301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680301 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 39/138 (28.26%), Postives = 66/138 (47.83%), Query Frame = 3 
Query:  132 INTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 545
            IN V+YY+P + Q  GF ++             N + T++   ++D FGRK L +    G+   + +L   F          V G + +  + LYIA F    GPV W + SE++P   +G    ++ T  W++N++V
Sbjct:  284 INAVLYYAPQMFQNLGFGADTALLQTISIGV-VNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCF-------WFKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILV 413
The following BLAST results are available for this feature:
BLAST of EY680301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
GLF_ZYMMO9.739e-1128.26Glucose facilitated diffusion protein OS=Zymomonas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-F03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680301 ID=EY680301; Name=EY680301; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATAC
TTGGATGTTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGC
TGGACTTCAGGCATTTCAGCAGTTCACTGGTATCAACACGGTCATGTACT
ACAGCCCGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCG
CTTCTCCTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGT
TGGAATTTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTA
GCTTAGCTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATC
AGTGGATCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCAT
CGGGTTAGCCCTATATATCGCTTTCTTTGCACCTGGAATGGGACCTGTGC
CATGGACTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGT
GGAGGTATGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCA
AACCTTCCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGA
TTCTTGCTGGGCATTGCCGTACTTGCAGTCGTGTTTGTGATTCTGTTTTG
TGCCAAAAACTCAAGGAATGGACATTTTTGGAAATAAAACAAAATGTGAA
AAGAAAGGCCCTGGGGAAATAATTTTAAAACCAAAAGCCCTCCTCAAGCA
AGGAAACAGTTCCTGAAAACCCTTTGGAAATTTAGGTAACTTTCCAAAAA
AAACTTTTCAACCGGTTTTTAACATCAACAAATTAAAAGGCCCAAGGGGC
CTTTACAAAAAAATGTTTTTAAAAAAACCACAAATAACCCCCTTCCCAC
back to top