EY680100

Overview
NameEY680100
Unique NameEY680100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 3
Query:   45 QFFLSLELEDLDRMLFGSEQAICVEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL-----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRI 410
            Q F   ELE    +L      I V DW  +TEY +GY+ +D  I WFW++V E+  E+R +LL F T    +P  GFA +          I       + LPTS TC   L  P YPS  ++ DRL +
Sbjct:  777 QLFDEYELE----LLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFTIAAVAYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLV 900          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   45 QFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            Q+    + ++L+ ML G ++ + + DW+ +T Y  Y  N  QIIWFW+ V E   E R  LL F T    LP+ GFA L      +    + V     LP SHTCF RL  P Y S   + ++L    +E  G
Sbjct:  783 QWLQYFDEKELEVMLCGMQE-VDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 914          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   45 QFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            Q+    + ++L+ ML G ++ + + DW+ +T Y  Y  N  QIIWFW+ V E   E R  LL F T    LP+ GFA L      +    + V     LP SHTCF RL  P Y S   + ++L    +E  G
Sbjct:  787 QWLQYFDEKELEVMLCGMQE-VDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 918          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 47/136 (34.56%), Postives = 62/136 (45.59%), Query Frame = 3
Query:   30 PRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL-----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQE 422
            PR     F   ELE    +L      I  +D KA+TEY  Y      I WFW++V     E     L F T    +P+EGF  L       RL I+K     +RLP++HTCF +L  P Y S   + +RL +   E
Sbjct: 3519 PRELVSIFNDKELE----LLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHE 3650          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HECW2_MOUSE (E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 3
Query:    3 KGFADILCNPRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNG-YKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQE 422
            +GF +++ + RL   F    +  +L+ ++ G+ + I + DW+ +TEY G Y +N   I WFW  V     EQR  LL F T    +P EGFA L      R    +       LP +HTCF RL  P YPS +++ ++L    +E
Sbjct: 1433 RGFYEVV-DARLVSVF----DARELELVIAGTAE-IDLNDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITALPRAHTCFNRLDLPPYPSFSMLYEKLLTAVEE 1571          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HECW2_HUMAN (E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 3
Query:    3 KGFADILCNPRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNG-YKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQE 422
            +GF +++ + RL   F    +  +L+ ++ G+ + I + DW+ +TEY G Y +N   I WFW  V     EQR  LL F T    +P EGFA L      R    +       LP +HTCF RL  P YPS +++ ++L    +E
Sbjct: 1427 RGFYEVV-DARLVSVF----DARELELVIAGTAE-IDLSDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITALPRAHTCFNRLDLPPYPSFSMLYEKLLTAVEE 1565          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   69 EDLDRMLFGS-EQAICVEDWKAHTEYNG-YKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVGCSF 440
            E+L++++ GS EQ++ V   ++ T Y G + +N   + WFW+I+ EM   Q++ LL F T    +P  G   +  R+   ++   ADRLP SHTCF  +C   Y     + ++L I  +E  G  F
Sbjct:  715 EELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIPFRISRIRS--GADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEESQGYGF 838          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 3
Query:   36 LQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLA-----SRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVM-GDRLRIITQEHVG 431
            + K      + ++L+ ++ G    I V+DWK +T Y  Y     QI +FW+ V     E+R  LL F T    +P+ GF  L+     S+  I++     DRLP+SHTCF +L  P+Y S   + G  L  I + H G
Sbjct: 3118 IPKDLISIFDEQELELLVSGLPD-IDVDDWKNNTIYVNYTPTCKQINYFWRAVRSFDKEERAKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEG 3254          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3
Query:   69 EDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            ++L+ ML G ++ I + DW+ +  Y  Y ++  QI WFW++V EM  E+R  LL F T    LPV GFA L      +      V     LP SHTCF RL  P Y S   + ++L    +E  G
Sbjct:  743 KELELMLCGMQE-IDMSDWQKNAIYRHYTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDRVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEG 866          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 3
Query:   36 LQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLAS-----RLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVM-GDRLRIITQEHVG 431
            + K      + ++L+ ++ G    I V+DWK +T Y  Y     ++ +FW+ V    AE+R  LL F T    +P+ GF  L+      +  I++    ++RLP+SHTCF +L  P Y S   + G  L  I + H G
Sbjct: 3128 ISKDLITIFDEQELELLISGLPD-IDVDDWKNNTTYVNYTATCKEVSYFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVCKFSIHRDFGSSERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEG 3264          
The following BLAST results are available for this feature:
BLAST of EY680100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HACE1_XENTR5.900e-1336.72E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropi... [more]
WWP1_MOUSE1.006e-1235.34NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus... [more]
WWP1_HUMAN1.006e-1235.34NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Hom... [more]
UPL2_ARATH1.006e-1234.56E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
HECW2_MOUSE1.006e-1233.79E3 ubiquitin-protein ligase HECW2 OS=Mus musculus ... [more]
HECW2_HUMAN1.006e-1233.79E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens ... [more]
HUL4_ASHGO1.717e-1233.33Probable E3 ubiquitin-protein ligase HUL4 OS=Ashby... [more]
TOM1_ASHGO2.242e-1233.33Probable E3 ubiquitin-protein ligase TOM1 OS=Ashby... [more]
WWP2_MOUSE2.928e-1236.80NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus... [more]
TOM1_YEAST2.928e-1231.16E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680100 ID=EY680100; Name=EY680100; organism=Citrus sinensis; type=EST; length=881bp
CGAAAGGTTTTGCTGACATTCTTTGTAACCCAAGGCTCCAGAAGCAGTTT
TTCCTGAGTTTAGAGCTTGAAGATCTTGATCGAATGCTGTTTGGAAGTGA
GCAAGCCATATGTGTTGAAGATTGGAAGGCACATACTGAATACAATGGCT
ACAAAGAAAATGATGCTCAGATAATCTGGTTTTGGAAGATTGTTGGAGAA
ATGCCAGCAGAGCAGAGAAAGATCCTGCTTTTCTTTTGGACCTCAGTAAA
GCATCTTCCAGTCGAGGGCTTTGCTGGTTTGGCTTCTCGGCTTCACATTT
ACAAGACCGTGGAACCCGCTGATCGCCTTCCTACATCGCACACCTGCTTT
TACCGGTTGTGTTTTCCGTCTTATCCATCCATGGCCGTCATGGGGGATCG
GCTTCGCATCATCACACAAGAACATGTGGGCTGCAGCTTTGGAACTTGGT
GAGATACTTTGTCTGCCCTGGCGTCACAAGCGTTTCTGACTGCACATAAA
TTTGTATTCAGTTTGTACAGAGTTATAGAATACCGTCTTCCATTTTATGA
TCAAGACTATGTTAAGAAGGTCGTCTAGTTAATTGTCTTTGTGTCGTGAA
GTTTATGGTGTCATTGCCCTTTTTGTCACCTGTTTATAAAATATATTTAT
ATAGAGAGAGAGAAAAGTATAGCTTACCTTATAAATAAAGGTTGTATTAC
CAACCAGGGCAGGCAAGGCAAGGGCAGGGAAGGGAAGGAAGGAAAAAAAT
TTTCCTTCTTCCAAAACTTACTTAAAAATAAGTAAAACCTTTCCGTTTTT
GGGTCAGGTAAATACCCCCAAATGGAATGCAAGGACATTCAAAATCCAAC
AAAAAATTTTTCCGCTCCCAAAAAAAAAAAA
back to top