EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_DESRM (50S ribosomal protein L24 OS=Desulfotomaculum reducens (strain MI-1) GN=rplX PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 K+HV+ GDTV VI G D GK G++ V + V+V+ +N+ +H APIHSSNVML+ + A+R+ KVLD+G + R GE + Sbjct: 3 KVHVRKGDTVMVITGKDAGKKGKVVTVEPAKNRVIVEGVNIVKRHRKATPQMPQGGIVEKEAPIHSSNVMLFCNKCNKATRIQKKVLDNGNKERICKHCGETL 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_DESAP (50S ribosomal protein L24 OS=Desulforudis audaxviator (strain MP104C) GN=rplX PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 KM+V+ GD V VI G D GK G+I + + V+V+ +N+ +H API SSNVML +RVG ++LDDGT+VR K GE + Sbjct: 3 KMNVRKGDKVVVITGKDAGKRGKIIEAIPDKNKVIVEGVNVVKRHSRPTRKLPQGGIQEKEAPIDSSNVMLLCARCHKPTRVGRRILDDGTKVRVCKKCGEAL 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOD6 (50S ribosomal protein L24 OS=Clostridium difficile (strain 630) GN=rplX PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12 Identity = 43/100 (43.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 M VK GDTV VIAG DKGK G + KV+ S V+V+ +N+ TKH APIH SNVM + E RV ++V DG +VR K+G+ Sbjct: 2 MRVKKGDTVVVIAGKDKGKKGSVLKVYPKTSKVLVEGVNVITKHQKPSAMNQQGGIINKEAPIHISNVMPFDPETGKGVRVRYEV-KDGNKVRVSAKSGK 100
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNFM (50S ribosomal protein L24 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 241 VKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +K DTV V+ G DKGK G++ +V +V+ +N+ +H+ +PIH SN+ML + +RVG+KVLDD +VR+ K E+ID Sbjct: 9 IKKNDTVMVVTGKDKGKSGKVLRVIYKKDRAIVEKLNMIKRHMKPSQQNRQGGILEKESPIHISNLMLICAKCTDPTRVGYKVLDDNKKVRFCKKCNEVID 109
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_GEOSL (50S ribosomal protein L24 OS=Geobacter sulfurreducens GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12 Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K H+K GDTV V+ G DK K G + ++ V+V+ +N+ +H AP+H SNVMLY + E R +L+DG +VR +K GE D Sbjct: 5 KFHIKKGDTVSVVTGKDKSKTGTVLRILPKRDGVLVEGLNIVKRHT-RARGNEPGGIVEKEAPLHVSNVMLYCGKCEKPVRAKKAILEDGKKVRVCVKCGEAFD 107
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACLD (50S ribosomal protein L24 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12 Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 MHVK GD V VI+G DKGK G I F V+V+ +N+ KH APIH SNVM + +RVG+KV ++G +VR K+G+++D+ Sbjct: 1 MHVKKGDKVMVISGKDKGKQGVILAAFPKKDRVIVEGVNMVKKHSKPTQANPQGGILNQEAPIHVSNVMPLDPKTGEVTRVGYKV-ENGKKVRIAKKSGQVLDN 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_KOSOT (50S ribosomal protein L24 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplX PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K DTVKVI+G KGKIG++ K V+++ +N +H API++ VM+ + +RVGHK L+ G +VR K GEIID Sbjct: 3 MRIKKDDTVKVISGEYKGKIGKVLKTLPKEGKVIIEGVNFTKRHQRPTNQYREGGIIEREAPIYACKVMVVCPNCDKPTRVGHKKLESGEKVRVCKKCGEIID 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_STAS1 (50S ribosomal protein L24 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rplX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 42/104 (40.38%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 MH+K GD VKVIAG DKGK G++ V+V+ +N+ KH A IH SNV L + +RVGHK + DG +VR K+GE I S Sbjct: 1 MHIKKGDNVKVIAGKDKGKEGKVVSTEPKKDRVVVEGVNIIKKHQKPTQFNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGHKFV-DGKKVRIAKKSGEEIKS 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PELCD (50S ribosomal protein L24 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rplX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KMHVK D V VIAG +KGK G+I +V V+V+++N+ +H AP+ +SNV L +R G +VL+DGT+ R+ K E +D Sbjct: 5 KMHVKKDDMVMVIAGKEKGKTGKIMRVLPGKGRVVVENLNVVKRHTRPNRVNTQGGIVEKEAPLDASNVALVCSACNKPTRTGVRVLEDGTKTRFCKKCNETLD 108
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_HELMI (50S ribosomal protein L24 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K+HV+ GD V+VI G D GK G+I +V + V+V+ +N+ +H API +SNVM++ + + R GHK L++G + R K G+++D Sbjct: 5 KVHVRKGDLVQVITGKDAGKKGKIIEVIPAKNRVVVEKVNIVKRHSKPSKTNPQGGIIEKEAPIDASNVMIFCPKCDRPVRSGHKFLENGDKARICRKCGDVLD 108 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |