EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_EXISA (50S ribosomal protein L24 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GDTV+V++G DKGK G I K + V+V+ +N+ KH APIH SNVM + +RVG KV+ DG +VR + K+GE +D Sbjct: 1 MHVKKGDTVQVMSGKDKGKQGVILKAMPSKNRVVVEGVNVMKKHAKPSQANPQGGILEIEAPIHVSNVMPLDPKTGKPTRVGFKVV-DGKKVR-VAKSGESLD 101
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LEUMM (50S ribosomal protein L24 OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=rplX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 M VK GD V+VIAG DKGK G ITK V+V+ +N+ KH APIH SNV L +RVG KV +DG ++R K+G ++ Sbjct: 1 MFVKTGDKVRVIAGKDKGKEGTITKTVAGKDRVVVEGVNIVKKHQKPSNEYPQGGVIDIEAPIHVSNVQLLDPSTNEPTRVGFKV-EDGKKIRVSKKSGNVL 101
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_GEOMG (50S ribosomal protein L24 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K HVK GDTV VIAG DK K G++ ++ V+V+ +N+ +H+ P+H SNVMLY + + R VL+DG +VR IK G+ D Sbjct: 5 KFHVKKGDTVSVIAGKDKSKTGKVIRILPKKDGVLVEGLNMVKRHMRARGNEPGGIVEKEN-PLHVSNVMLYCDKCKKPVRSKMNVLEDGKKVRVCIKCGDSFD 107
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CYTH3 (50S ribosomal protein L24 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rplX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 K+HV+ GD V VI+G DK K G++ V + N +V+ IN+ TKH APIH S +M+ + A+R+G K +G VRY ++GE+I Sbjct: 8 KLHVRTGDNVIVISGDDKRKSGKVLSVDKENQKAIVEGINIVTKHNKPTANVPNGGIVKKEAPIHISKLMIADPKTGKATRIGRKEDKNGKMVRYAKQSGEVI 110
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_MAGSA (50S ribosomal protein L24 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplX PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M+VK GD V V+AG DKGK GE+ V+V+ +NL +H A IH SNV + A+R+GHK+L+DG +VR ++GE+ID Sbjct: 4 MNVKKGDRVVVLAGKDKGKKGEVIAAMPSEQRVIVQGVNLVKRHTRPSATSQGGIVEKE-ASIHVSNVAHEDPKDGKATRIGHKILEDGRKVRVARRSGEVID 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_DESOH (50S ribosomal protein L24 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rplX PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K+++K D VKV+AG DKGKIG++ V R + ++V++IN+ +H API SNVML + R+ K L+DG +VR K E+ID Sbjct: 5 KVNIKKNDKVKVVAGKDKGKIGKVLSVNREKNRLVVENINMIKRHTRPNVSNRQGGIIEREAPIDRSNVMLMCGKCVTPVRIKMKELEDGRKVRMCGKCKELID 108
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CARHZ (50S ribosomal protein L24 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplX PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 40/104 (38.46%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K+ VK GD V VIAG DK K G+I +V + V+V+ +N+ +H APIH SNVM+ +RVG K L DG ++R K GE +D Sbjct: 3 KLKVKKGDMVLVIAGKDKDKKGKIVQVLPKENRVVVEGVNIVKRHTRPNPKLPQGGIVEKEAPIHVSNVMVICPSCGKPTRVGKKFLADGKKIRVCKKCGESLD 106
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_THAPS (50S ribosomal protein L24, chloroplastic OS=Thalassiosira pseudonana GN=rpl24 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 217 LPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVML 444 +P +HVK GD VK+I+G DK K GE+TK++R+ ++VK IN K KH+ APIH SNV L Sbjct: 1 MPKGKNLHVKIGDNVKIISGFDKNKTGEVTKIYRNTGKILVKGINFKFKHIKPNTESDVGEIKQFEAPIHHSNVKL 76
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_STAAW (50S ribosomal protein L24 OS=Staphylococcus aureus (strain MW2) GN=rplX PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 MH+K GD VKVIAG DKGK G++ V+V+ +N+ KH A IH SNV L + +RVG+K + DG +VR K+GE I S Sbjct: 1 MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSGEEIKS 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_STAAT (50S ribosomal protein L24 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rplX PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 MH+K GD VKVIAG DKGK G++ V+V+ +N+ KH A IH SNV L + +RVG+K + DG +VR K+GE I S Sbjct: 1 MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSGEEIKS 103 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |