EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACCB (50S ribosomal protein L24 OS=Lactobacillus casei (strain BL23) GN=rplX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11 Identity = 41/103 (39.81%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M K GD V+V+ G D GK G+ITKV + V+V+ IN+ KH APIH SNVML + +R+G +V DG +VR K+G ID Sbjct: 1 MKFKTGDKVRVMRGKDAGKEGQITKVLKDADKVVVEGINMIKKHQKPNNANPQGGIIDKEAPIHVSNVMLLDPDTNKPTRIGSEV-KDGNKVRIAKKSGTAID 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACC3 (50S ribosomal protein L24 OS=Lactobacillus casei (strain ATCC 334) GN=rplX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11 Identity = 41/103 (39.81%), Postives = 54/103 (52.43%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M K GD V+V+ G D GK G+ITKV + V+V+ IN+ KH APIH SNVML + +R+G +V DG +VR K+G ID Sbjct: 1 MKFKTGDKVRVMRGKDAGKEGQITKVLKDADKVVVEGINMIKKHQKPNNANPQGGIIDKEAPIHVSNVMLLDPDTNKPTRIGSEV-KDGNKVRIAKKSGTAID 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PORGI (50S ribosomal protein L24 OS=Porphyromonas gingivalis GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 + K+H+K GDTV VI+G DKG G + +V +V+ +N+ KH APIH SN+ + + A+R+G ++ ++G VRY K+GE I Sbjct: 1 MSKLHIKKGDTVMVISGEDKGHSGRVLEVLVKEQRAIVEGLNMIKKHAKPSAKNPQGGIISKEAPIHISNLNVVDPKTGKATRIGRRLNENGKLVRYAKKSGEEI 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PORG3 (50S ribosomal protein L24 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 + K+H+K GDTV VI+G DKG G + +V +V+ +N+ KH APIH SN+ + + A+R+G ++ ++G VRY K+GE I Sbjct: 1 MSKLHIKKGDTVMVISGEDKGHSGRVLEVLVKEQRAIVEGLNMIKKHAKPSAKNPQGGIISKEAPIHISNLNVVDPKTGKATRIGRRLNENGKLVRYAKKSGEEI 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACRJ (50S ribosomal protein L24 OS=Lactobacillus reuteri (strain JCM 1112) GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VIAG DKGK G I KV + V+V+ +N+ KH A I++SNVML +RVG+K + DG +VR K+G+ +D Sbjct: 1 MFIKTGDKVRVIAGKDKGKEGTIKKVLASQNRVIVEGVNIVKKHQKPSNSNPNGGVIDTEAAINASNVMLIDPSTNEPTRVGYKFV-DGKKVRVAKKSGKTLD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACRD (50S ribosomal protein L24 OS=Lactobacillus reuteri (strain DSM 20016) GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VIAG DKGK G I KV + V+V+ +N+ KH A I++SNVML +RVG+K + DG +VR K+G+ +D Sbjct: 1 MFIKTGDKVRVIAGKDKGKEGTIKKVLASQNRVIVEGVNIVKKHQKPSNSNPNGGVIDTEAAINASNVMLIDPSTNEPTRVGYKFV-DGKKVRVAKKSGKTLD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_DEIGD (50S ribosomal protein L24 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K+HVK GDTV V+ G KG+ G++ ++ V+V+ +NL TKHV A +H+S V L E +RV K + DG +VR +K+G++ID Sbjct: 13 KLHVKKGDTVIVLRGKHKGQTGKVLLALPRDAKVVVEGVNLVTKHVKPSAANPQGGIEQREAALHASKVALVDPETGKPTRV-RKAIVDGKKVRVAVKSGKVID 115
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CALS8 (50S ribosomal protein L24 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDG---TRVRYLIKTGEIID 543 +K+HVK GDTV VI+G KGK G++ V + V+V+ +N+ KHV API + VML + +R+GH+ + +G +VR K GEIID Sbjct: 3 NKVHVKKGDTVVVISGKYKGKQGKVLTVLPKDKKVVVEGVNIVKKHVRPNPKMPQGGIITQEAPIWACKVMLVCPKCNKPTRIGHRFIQEGEEEKKVRTCKKCGEIID 110
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_NATTJ (50S ribosomal protein L24 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTG 531 K+HVK+GDTV VI+G DKGK G++ + F V+V+ +N+ KH P+++ VM+Y + + R G K+ D G + R K G Sbjct: 5 KLHVKSGDTVVVISGKDKGKRGKVLRTFPSEQKVLVEGVNMINKHTRATQENPQGGIVEQEGPVYADKVMVYCSKCQKPVRTGAKIDDKGNKSRICKKCG 104
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_COXBU (50S ribosomal protein L24 OS=Coxiella burnetii GN=rplX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 241 VKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXA-PIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +K DTV VI G DKG+ G++ KV NS ++V+ INL KHV IH SNV +Y+ + A RVG K L+DG++VR GE+ID Sbjct: 6 IKKDDTVIVITGRDKGRQGKVLKVLP-NSRLLVEGINLVKKHVKPNPNKNEQGGILERELSIHVSNVAIYNPAAKKADRVGIKTLEDGSKVRIFKSNGEVID 106 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |