EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROMA (50S ribosomal protein L24 OS=Prochlorococcus marinus GN=rplX PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 199 ECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 + K SLP+ KM ++ GDTV+VI G +KGK GE+ K + V+V+ INL+T+HV A +H+SNVM+YS + + ASRV + DG++ R L KTGE+ID Sbjct: 6 QTKKASLPI--KMRIRKGDTVQVINGKEKGKTGEVLKTLPIENRVIVQGINLRTRHVKPTQEGESGRIVTEEASLHASNVMVYSTKQKTASRVEVFIDKDGSKKRRLKKTGELID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROM3 (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplX PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HV A +H+SNVMLYS ++ASRV V DG++ R L KTGE+ID Sbjct: 15 KMRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTEEASVHASNVMLYSNNKKIASRVALVVEKDGSKKRRLKKTGELID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROMS (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain AS9601) GN=rplX PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.509e-16 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM +K GD VKVI G DKGK GE+ K + V+VK INL+TKHV A +H+SNVM +SK+ + S++ + + +G + R L KTGE+ID Sbjct: 15 KMRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEEASLHASNVMFFSKDKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROMM (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplX PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.509e-16 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HV A +H+SNVMLYS + ++ASRV V DG++ R L KTGE+ID Sbjct: 15 KMRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTEEASVHASNVMLYSNKKKIASRVELVVEKDGSKKRRLKKTGELID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROM2 (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplX PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM +K GD VKVI G +KGK GE+ K + V+VK INL+TKHV A +H+SNVM +SKE + S++ + + +G + R L KTGE+ID Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENKVVVKGINLRTKHVKPTQEGETGRILTEEASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROM0 (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplX PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM +K GD VKVI G +KGK GE+ K + V+VK INL+TKHV A +H+SNVM +SKE + S++ + + +G + R L KTGE+ID Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEEASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNPX (50S ribosomal protein L24 OS=Synechococcus sp. (strain WH8102) GN=rplX PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VIAG DKGK GE+ + + + ++V+ +N++T+H A +H+SNVMLYS +VASRV V DG++ R L KTGE++D Sbjct: 15 KMRIRKGDTVQVIAGKDKGKTGEVLRTLPNENRLIVEGVNMRTRHEKPTQEGETGRIVNEEASLHASNVMLYSTAKKVASRVEIVVEKDGSKKRKLKKTGEVLD 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROM9 (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplX PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM +K GD VKVI G DKGK GE+ K + V+VK INL+TKHV A +H+SNVM +SK+ + S++ + + G + R L KTGE+ID Sbjct: 15 KMRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEEASLHASNVMFFSKDKNLTSKIEYFIDKQGVKKRRLKKTGEVID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROMT (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain NATL2A) GN=rplX PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.361e-16 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHV +H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID Sbjct: 15 KMKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETKEFSLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLONN (50S ribosomal protein L24 OS=Clostridium novyi (strain NT) GN=rplX PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 K+HV+ D V VI+G DKGK+ E+ V+ S V+VKD N+ TKHV AP++SS VMLY A+R+ K+L+DGT+VR K GEI+ Sbjct: 3 KVHVRRTDKVVVISGKDKGKVSEVLAVYPKTSKVLVKDANVVTKHVKPNRENMQGGIVKKEAPMNSSKVMLYCTNCNSATRISKKLLEDGTKVRVCKKCGEIL 105 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |