EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOB8 (50S ribosomal protein L24 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplX PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.279e-15 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ K + V+V+ +N+ KH A I+SS VMLY + + A+R+ +KVLDDGT+VR K GE Sbjct: 2 KIHVRKNDTVIVISGKDKGKTGEVLKAYPKTGKVLVQGVNIVKKHQKANKGQVESAIIEKEAAINSSKVMLYCNKCKNATRISNKVLDDGTKVRVCKKCGE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOK5 (50S ribosomal protein L24 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplX PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 K+HV+ DTV +I+G DKGK GE+ V S V+V IN+ +KH A I+SS VMLY ++ + +R+ HK+L+DGT+VR K GE + Sbjct: 3 KVHVRKKDTVMIISGKDKGKTGEVLAVMPKVSKVLVSGINIVSKHQKPNKQNMEGGIIRKEAAIYSSKVMLYCEKCKSVTRISHKILEDGTKVRVCKKCGETL 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOBA (50S ribosomal protein L24 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rplX PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ KV+ V+V+ IN+ KH A I+SS VMLY + + A+R+ +K+LDDGT+VR K E Sbjct: 2 KVHVRKSDTVVVISGKDKGKTGEVLKVYPKTGKVLVQGINIVKKHQKANKSQVESAIIEREAAINSSKVMLYCNKCKNATRIANKILDDGTKVRVCKKCSE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ANOFW (50S ribosomal protein L24 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplX PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GD V+VI+G DKGK G I F + V+V+ +N+ KHV APIH SNVM + + +RVG+KV+ DG +VRY ++GEI+D Sbjct: 1 MHVKKGDKVQVISGKDKGKQGVILAAFPKKNRVLVEGVNIVKKHVKPSQANPQGGIINQEAPIHVSNVMPLDPKTGLPTRVGYKVV-DGKKVRYAKRSGEILD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOPE (50S ribosomal protein L24 OS=Clostridium perfringens GN=rplX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ +V V+VK +NL KH A I+SS VML+ ++ + A+R+ HK+L+DG +VR K GE Sbjct: 2 KVHVRKNDTVVVISGKDKGKTGEVLRVIPKTGKVVVKGVNLVKKHQKPNRQNMQGGIIEMEAAINSSKVMLFCEKCKKATRISHKLLEDGAKVRVCKKCGE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOP1 (50S ribosomal protein L24 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rplX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ +V V+VK +NL KH A I+SS VML+ ++ + A+R+ HK+L+DG +VR K GE Sbjct: 2 KVHVRKNDTVVVISGKDKGKTGEVLRVIPKTGKVVVKGVNLVKKHQKPNRQNMQGGIIEMEAAINSSKVMLFCEKCKKATRISHKLLEDGAKVRVCKKCGE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOBB (50S ribosomal protein L24 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14 Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ KV+ V+V+ IN+ KH A I+SS VMLY + + A+R+ K+LDDGT+VR K E Sbjct: 2 KVHVRKSDTVVVISGKDKGKTGEVLKVYPKTGKVLVQGINIVKKHQKANKSQVESAIIEREAAINSSKVMLYCNKCKNATRIASKILDDGTKVRVCKKCSE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_GUITH (50S ribosomal protein L24, chloroplastic OS=Guillardia theta GN=rpl24 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14 Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIK 525 M +K GD V+VIAG KG+I E+ KV R ++++++K+IN+K KHV APIH SNVMLY +E ++ SR + DG +VR L K Sbjct: 1 MTIKQGDKVQVIAGSYKGEITEVLKVIRKSNSLILKNINIKNKHVKPKKEGEVGQIKQFEAPIHRSNVMLYDEESQIRSRSKFIISQDGKKVRVLKK 97
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_FERNB (50S ribosomal protein L24 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=rplX PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 241 VKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +K GDTV+VI+G DKGK GE+ +V ++V+ +N+ +H AP++ S VML + A+RVG +VL+DG++VRY K GEIID Sbjct: 5 IKKGDTVQVISGKDKGKRGEVIQVLPKEEKLIVRGVNIVKRHQRPTGQMRQGGIIEKEAPLYWSKVMLVCPSCDKATRVGFRVLEDGSKVRYCKKCGEIID 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ALKMQ (50S ribosomal protein L24 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplX PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK D V VI+G DKGK G+I ++V+ +N+ TKH A IH SNV+L+ K+ R GHKVL++G +VR KTGE++D Sbjct: 1 MHVKKDDIVVVISGKDKGKKGKILHAIPKKERIIVEGVNMVTKHQKPTQQSQQGGIIKQEAAIHVSNVLLWDKKANQGVRAGHKVLENGEKVRVSKKTGEVLD 103 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |