EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ALKOO (50S ribosomal protein L24 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rplX PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GDTV VI G DKGK G++ +V + V+V+ + + TKH A I +SNVM++ K+ RVG+K L++G +VR KTGE+ID Sbjct: 1 MHVKKGDTVVVITGKDKGKKGKVLQVLPKKNRVIVEGVAMVTKHQKPNQQMQQGGRIEQEAAIDASNVMIWDKKANQGVRVGYK-LENGKKVRVSKKTGEVID 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THESQ (50S ribosomal protein L24 OS=Thermotoga sp. (strain RQ2) GN=rplX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VI+G DKGK G++ +V + V+V+++N+ +H API++S VM+ + +RVG++ +DG +VRY K GEIID Sbjct: 1 MRIKKGDLVEVISGKDKGKRGKVLRVIPKENKVIVENVNMVKRHQRPIPQLREGGIIEREAPIYASKVMVVCPACDKRTRVGYRFTEDGKKVRYCKKCGEIID 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEPX (50S ribosomal protein L24 OS=Thermoanaerobacter sp. (strain X514) GN=rplX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 +K+HVK GD V VI+G DKGK G++ + F V+V+ +N+ TKH API+SS VMLY + R G KVL++G ++RY + E + Sbjct: 4 NKLHVKKGDMVVVISGKDKGKKGKVLQAFPKEGKVIVEGVNIVTKHRKATSPQKPGGIIHQEAPIYSSKVMLYCENCGRGVRYGVKVLENGEKIRYCKRCNETL 107
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEP3 (50S ribosomal protein L24 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 +K+HVK GD V VI+G DKGK G++ + F V+V+ +N+ TKH API+SS VMLY + R G KVL++G ++RY + E + Sbjct: 4 NKLHVKKGDMVVVISGKDKGKKGKVLQAFPKEGKVIVEGVNIVTKHRKATSPQKPGGIIHQEAPIYSSKVMLYCENCGRGVRYGVKVLENGEKIRYCKRCNETL 107
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEP1 (50S ribosomal protein L24 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VI+G DKGK G++ +V + V+V+++N+ +H API++S VM+ + +RVG++ +DG +VRY K GEIID Sbjct: 1 MRIKKGDLVEVISGKDKGKRGKVLRVIPKENKVIVENVNMVKRHQRPIPQLREGGIIEREAPIYASKVMVVCPACDKRTRVGYRFTEDGKKVRYCKKCGEIID 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEMA (50S ribosomal protein L24 OS=Thermotoga maritima GN=rplX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VI+G DKGK G++ +V + V+V+++N+ +H API++S VM+ + +RVG++ +DG +VRY K GEIID Sbjct: 1 MRIKKGDLVEVISGKDKGKRGKVLRVIPKENKVIVENVNMVKRHQRPVPQLREGGIIEREAPIYASKVMVVCPACDKRTRVGYRFTEDGKKVRYCKKCGEIID 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACSK (50S ribosomal protein L24 OS=Bacillus clausii (strain KSM-K16) GN=rplX PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.749e-13 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 MHVK GD V VI G DKGK G + + + S V+V+ +N+ KH APIHSSNVML + +RVG+K ++G +VR K+GEII Sbjct: 1 MHVKKGDKVVVITGKDKGKQGTVLEAYPKKSRVLVEGVNMVKKHAKPSQDNPQGGILNQEAPIHSSNVMLVDPKTGERTRVGYKE-ENGKKVRVAKKSGEII 101
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACBA (50S ribosomal protein L24 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rplX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 M +K GD V+VIAG DKGK G ++KV + V+V+ +N+ KH APIH+SNVML +R+G +V +DG +VR+ K+GE ID Sbjct: 1 MLIKTGDKVRVIAGKDKGKEGTVSKVLNAKNRVIVQGVNMIKKHQKASQTNPQGGIIDIEAPIHASNVMLIDPSNNEPTRLGVRV-EDGHKVRFAKKSGETID 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACHK (50S ribosomal protein L24 OS=Bacillus thuringiensis subsp. konkukian GN=rplX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GD V+VI G DKGK G I F + V+V+ +N+ KH APIH SNVM+ + +RVG KV +DG +VR K+GE++D Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACCZ (50S ribosomal protein L24 OS=Bacillus cereus (strain ZK / E33L) GN=rplX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GD V+VI G DKGK G I F + V+V+ +N+ KH APIH SNVM+ + +RVG KV +DG +VR K+GE++D Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |