EY680062

Overview
NameEY680062
Unique NameEY680062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 2
Query:   11 RPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 268
            +PVSVA +     F+ Y SGV++  +CG    +++H VVAVGYG +   G  YW ++NSWG +WG++GY +ME         CGIA  ASYP+
Sbjct:  286 QPVSVAIDAGGREFQLYDSGVFTG-RCGT---NLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPI 374          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            P+  AF V   F +Y+SGVY  T      ++  HAV  VGYG +D GV YW+IKNSWG +WG+ GYF++    N CGI
Sbjct:  214 PLQTAFTVYSDFMYYESGVYQHTY---GRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGI 288          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY         +   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  248 PVEGAFTVYSDFLQYKSGVYQHV---TGDLMGGHAIRILGWGVENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PVSVA +VVD    YKSGV    K  +    +NH V+ VGYG E+ V YW +KNSWG +WG+ G+F+++   N CGI
Sbjct:  260 PVSVAIDVVD-LTNYKSGV---AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   41 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 271
            + F+ YK G+Y    C +    V H V+ VGYG +    DG  YWLIKNSWG+ WG  GY K+   K N CGIA+ A YP +
Sbjct:  255 ESFKNYKGGIYHEPNCSSDT--VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIASYAHYPTI 334          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 2
Query:   11 RPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 268
            +PVS+A E     F+ YKSG+++  KCG     V+H VV  GYG E+G+ YW+++NSWG N  ++GY +++        +CG+A   SYPV
Sbjct:  147 QPVSIALEAGGRDFQHYKSGIFTG-KCGTA---VDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV 233          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            P+ +AFEV + F  Y  GVY  T      +   HAV  +G+G++DG+PYW + NSW  +WG+ G+F++  G + CGI
Sbjct:  275 PLEIAFEVYEDFLNYDGGVYVHT---GGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGVDECGI 348          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED------GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 274
            P+S+     +  +FY+ GV    K   +  +++H V+ VGYGV D       +PYW++KNSWG  WG+ GY+++  G N CG++  A+  V+A
Sbjct:  523 PISIGINA-NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+ VPYW+IKNSWGE+WG++G+ ++    N CG+
Sbjct:  285 PVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            P+ VA +  D    YK G+     C N  +  NHAV+ VGYGVE+G+P+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  242 PIPVAIDASD-IVGYKRGIIRY--CENHGL--NHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
The following BLAST results are available for this feature:
BLAST of EY680062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
CYSP1_ORYSJ7.324e-1444.09Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATB3_GIALA7.324e-1448.72Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATB_PIG9.565e-1446.75Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATV_GVXN1.249e-1349.35Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATR_MOUSE1.249e-1346.34Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CYSPL_SOLLC1.632e-1341.76Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR6_CAEEL1.632e-1341.56Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CPR1_DROME1.632e-1336.56Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_NPVHZ1.632e-1340.26Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_NPVAP1.632e-1345.45Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-A05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680062 ID=EY680062; Name=EY680062; organism=Citrus sinensis; type=EST; length=907bp
CCCGCGTCCGCGACCTGTGAGTGTGGCATTTGAAGTAGTAGATGGATTCC
GATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATGTGGAAATACTCCC
ATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACGGAGTTGAAGATGG
TGTTCCATATTGGCTGATTAAGAACTCTTGGGGAGAGAACTGGGGCGATC
ATGGCTACTTTAAGATGGAGATGGGGAAGAACATGTGTGGTATTGCAACT
TGTGCATCATACCCAGTTGTGGCTTAGTCTGCTCCTGAAGAAATAGTTGG
ATCTGGCTATCAGCAAGTCATTTGCTCATAAAACTTATATTATTTCACTC
AAGCATGATAGCAGAATGGTTGGCTTTATGTACAAAATAAATTCGGAGAT
TAATGTCCATATAATCTACAATAGCAATGCATGGCTGCTTGATGTTCAAA
ATAAATTCTGAGATCTATGTCCATGTAAACAGTCATTGTGACTAGGACAC
CACCGATGTTATATATATTTTGTCAATGCAAGGTAGTTGTTATCCACCAA
CACGCAGCCCCCCGATCCCGACAAAGCTCGAACACAAAACAGAACACAAA
ACCCTGACAAGAACAAAAGAGGGGGGGGCCGCTCCAAGGGAATCAACCTA
ACGTACCCGTGCCGGGCGGACGTCCAACCCCTTCTTATAGGGGGTCCCCA
AATTTACATTTCCCGGGGCGGCTTTTTTTTAAACTCTGTCGAAGGGGAAA
AACCCCGGCGTTTTACCCAATATTTTCCCCCTTGTGCACCAACTCCCCCT
TTTTTCCGCCGCTGTGGTAAAAAGCCAAAAAGCCCCCCCCCCCATACCCC
CCCTTCCCCCCCGGTTCGCCCCGGCCACCGAACTGGTGTAGGTGGGGACC
CCCCCCC
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