EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH21_ARATH (DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana GN=RH21 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.471e-21 Identity = 49/126 (38.89%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I+ +G +P+P++S+ + +++ + +AG+ +P+PIQ P+ L+ RD+IGIAETGSGKT A++LP + +++ P + N GP +V+APTRELA QI++E+ KF + T + GG Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGG 426
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_CRYNE (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans GN=PRP28 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.471e-21 Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I G +P P++++R+ P ++ I + G+ EP+PIQ Q P+ ++ RDLIG+A+TGSGKT A+++P + ++ P L N GP L++APTRELA QI+ E+ +F K + GG Sbjct: 303 IAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGG 428
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_ASPNC (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=prp28 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.471e-21 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP-----PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I+ +G VP P++S+ + P +M+ I++ G+ EPTPIQ P+A++ RDLIG+A TGSGKT A+LLP + ++ P + +GP +VLAPTRELA QI+ E+ KF + GG Sbjct: 360 ISTKGGSVPNPMRSWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKADGPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGG 487
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_YARLI (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia lipolytica GN=PRP28 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.237e-20 Identity = 57/127 (44.88%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVG-FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG---NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 +T G ++P P++S+ + P V IS+ G+ EPTPIQ P+AL RD+IG+AETGSGKT ++L+P I ++ P L NGP L+LAPTRELA+QI+ E+ KF A K + GG Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGG 276
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_EMENI (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella nidulans GN=prp28 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.237e-20 Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP-----PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I +G VP P++S+ + G P +++ + + G+ EPTPIQ P+A++ RDLIG+A TGSGKT A+LLP + ++ P + +GP +VLAPTRELA QI+ E+ KF + GG Sbjct: 334 IATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGG 461
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_ASPTN (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prp28 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.237e-20 Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP-----PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I +G VP P++S+ + G P ++ + + G+ +PTPIQ P+A++ RDLIG+A TGSGKT A+LLP +V++ P + +GP +VLAPTRELA QI+ E+ KF + GG Sbjct: 331 IATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTIPLGFTVVSIVGG 458
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH35B_ORYSJ (DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica GN=Os06g0697200 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.616e-20 Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL---PPGNGPIVLVLAPTRELAVQIQQESTKFGAS------SQIKSTCLYGGVPQGT 509 I V+G DVP P +SF D+ P+ +++ + G +PTPIQ QG P+AL GRD+IGIA TGSGKTL ++LP I+ + L PG GP L++ P+RELA Q + F A +I+ GGV T Sbjct: 161 ILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRT 297
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_CHAGB (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium globosum GN=PRP28 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.616e-20 Identity = 52/126 (41.27%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I +G +P P++S+ + P +++ + G+ EPTPIQ P+A + RDLIG+A TGSGKT A+LLP +V+++ P L N GP L+LAPTREL QI+ E+ KF + GG Sbjct: 257 IATKGGAIPNPMRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEFNKNDGPYALILAPTRELVQQIETEARKFAGPLGFTVVSIVGG 382
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: VASA_DROME (ATP-dependent RNA helicase vasa OS=Drosophila melanogaster GN=vas PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.756e-20 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 + V G DVP+P++ F D ++ ++K+G+ PTPIQ P+ GRDL+ A+TGSGKT A+LLP + + P P V++++PTRELA+QI E+ KF S +K +YGG Sbjct: 233 VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGG 355
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_GIBZE (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella zeae GN=PRP28 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.756e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I +G +P P++S+++ P ++ + G+ +P+PIQ P+AL+ RDLIG+A TGSGKT A+LLP +V+++ P L N GP L++APTREL QI+ E+ KF + + GG Sbjct: 276 IATKGGMIPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHDGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGG 401 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |