EY744817

Overview
NameEY744817
Unique NameEY744817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX5_PONAB (Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.095e-44
Identity = 88/165 (53.33%), Postives = 113/165 (68.48%), Query Frame = 3
Query:   12 RKLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            +K DL     FE NFY E P +A  +            ITV G + PKPV +F +  FP  VM  I++  F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL  G+GPI LVLAPTRELA Q+QQ + ++  + ++KSTC+YGG P+G
Sbjct:   44 KKWDLDEPPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKG 208          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX5_MOUSE (Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.097e-44
Identity = 87/165 (52.73%), Postives = 113/165 (68.48%), Query Frame = 3
Query:   12 RKLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            +K +L  L  FE NFY E P +A  +            ITV G + PKPV +F +  FP  VM  I++  F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N  PFL  G+GPI LVLAPTRELA Q+QQ + ++  + ++KSTC+YGG P+G
Sbjct:   44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARHNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHHPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKG 208          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.240e-37
Identity = 75/127 (59.06%), Postives = 95/127 (74.80%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            I+V G DVP P+ SF   GFP  +++E+ +AGF  PTPIQAQ WP+AL+GRD++ IA+TGSGKTL YL+PA +H+  Q    P  GP +LVL+PTRELA QIQ E+ KFG SS+I  TCLYGG P+G
Sbjct:  133 ISVTGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPAFIHLQ-QRRKNPQLGPTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKG 258          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_ENCCU (ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi GN=DBP2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.608e-36
Identity = 77/165 (46.67%), Postives = 109/165 (66.06%), Query Frame = 3
Query:    9 PRKLD-LPPLTP--FEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            P++ D +P L P  F+ NFY E+ S++ M+            + V+G +VP P++ F + GF   V+  + + GF EPT IQ QGWPMAL GRD++GIA+TGSGKTL+++LPA+VH   Q  L  G+GPIVLVLAPTREL +QI++   +F     ++ST +YGG
Sbjct:   33 PQRYDPMPELAPVEFQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGG 197          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH40_ORYSJ (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.100e-36
Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            ITV G +VP P+ SF   GFP  +++EI +AGF  PTPIQAQ WP+AL+ +D++ IA+TGSGKTL YLLP  +H+       P +GP VLVLAPTRELA QI +E+ KFG SS+I STCLYGG P+G
Sbjct:  138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQ-NNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKG 263          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH14_ARATH (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.322e-35
Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = 3
Query:   60 VESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            V  PS A  S            ITV G  VP P+ SF   GFP  +++E+  AGF  PTPIQAQ WP+A++GRD++ IA+TGSGKTL YL+P  +H+  +       GP +LVL+PTRELA QIQ+E+ KFG SS+I  TCLYGG P+G
Sbjct:  124 VPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQ-RIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKG 271          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH24_ORYSJ (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.173e-35
Identity = 80/165 (48.48%), Postives = 100/165 (60.61%), Query Frame = 3
Query:   24 LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497
            +PPL        PF  +FY E PSV+ MS            I V G DVP+P+KSF D GFP  +M  I+K G+ +PT IQ Q  P+ L GRD+IGIA+TGSGKT A++LP IVH+  QP L    GPI +V APTRELA QI  E+ KF     ++   +YGGV
Sbjct:  166 IPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGV 330          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH14_ORYSJ (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica GN=Os01g0172200 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.664e-33
Identity = 67/127 (52.76%), Postives = 90/127 (70.87%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            IT+ G + P P  +F+  GFP  +++E+ +AGF  PTPIQAQ WP+AL+ RD++ +A+TGSGKTL YL+P  + +         +GP VLVL+PTRELA QIQ E+ KFG SS+I S CLYGG P+G
Sbjct:  168 ITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQH-NSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKG 293          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH46_ARATH (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana GN=RH46 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.079e-32
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   69 PSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            PS AA +            ITV G  VP P+ SF   G P+ +++E+  AGF  P+PIQAQ WP+A++ RD++ IA+TGSGKTL YL+P  +H+  +       GP +LVL+PTRELA QIQ E+ KFG SS+I   CLYGG P+G
Sbjct:  130 PSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQ-RIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKG 274          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH40_ARATH (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.099e-32
Identity = 72/150 (48.00%), Postives = 95/150 (63.33%), Query Frame = 3
Query:   57 YVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506
            +V SP V  +S            +T  G ++P P  +F   G P  +++E+  AGF  PTPIQAQ WP+AL+ RD++ IA+TGSGKTL YL+PA + +         NGP VL+LAPTRELA QIQ E+ +FG SS+I  TCLYGG P+G
Sbjct:  402 FVTSPDVPHLSPVEIYRKQHE--VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLR-HCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKG 548          
The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DDX5_PONAB2.095e-4453.33Probable ATP-dependent RNA helicase DDX5 OS=Pongo ... [more]
DDX5_MOUSE6.097e-4452.73Probable ATP-dependent RNA helicase DDX5 OS=Mus mu... [more]
DB10_NICSY3.240e-3759.06ATP-dependent RNA helicase-like protein DB10 OS=Ni... [more]
DBP2_ENCCU1.608e-3646.67ATP-dependent RNA helicase DBP2 OS=Encephalitozoon... [more]
RH40_ORYSJ2.100e-3659.06DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sa... [more]
RH14_ARATH2.322e-3551.01DEAD-box ATP-dependent RNA helicase 14 OS=Arabidop... [more]
RH24_ORYSJ5.173e-3548.48DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sa... [more]
RH14_ORYSJ1.664e-3352.76DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sa... [more]
RH46_ARATH1.079e-3248.63DEAD-box ATP-dependent RNA helicase 46 OS=Arabidop... [more]
RH40_ARATH4.099e-3248.00DEAD-box ATP-dependent RNA helicase 40 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAGGAAGTTGGATTTGCCCCCTTTGACTCCTTTTGAGATG
AACTTCTATGTTGAGTCCCCCTCAGTGGCTGCAATGTCGGAGAGGGAAGT
CGAGGAGTATCGACAGCAGAGGGAAATCACAGTTGAAGGTCCCGATGTTC
CAAAACCTGTCAAGAGTTTCCGTGATGTCGGTTTTCCAGATTATGTTATG
CAAGAAATATCAAAAGCTGGCTTTTTTGAACCCACACCTATACAAGCTCA
GGGATGGCCAATGGCTTTGAAAGGTCGTGATCTCATTGGAATTGCTGAAA
CAGGCTCAGGAAAAACTCTGGCTTATCTCTTGCCTGCTATTGTCCATGTT
AATGCCCAGCCATTTTTACCTCCTGGAAATGGCCCAATTGTGCTAGTTCT
AGCTCCAACTCGTGAACTTGCTGTTCAAATACAACAAGAATCTACTAAAT
TTGGTGCATCCTCACAGATTAAAAGTACGTGCCTCTATGGGGGAGTTCCA
CAGGGAACTCCAGTTCCTGATCCGCCCAAGGGTGCCCCCAGTGCCCCCCC
CCCCCCCCCGAGGGTCCCGGCCCCGGCGGACGCCCCTAACGCCCATCCAC
CCAAGCGCCCCTTCCCTTTCCCCCCGCCCCCGCTAACCCGATGNTNCCAC
CCCCACCCCCCCGCCCGCCCGCCCGCGCCCGCCCCGCCCCNCGTCGGNTN
CCAGGGCGTGAAACTCATGCAGTCGCGCCCGAGCCATAGNTNTNNNGTGG
GTNANGTTNGTNTNTCCGGGGTCCCATTCCCCCGGCCACACCCCCCCCCA
CACAGCCCCCCCCTCCCCAGCCCCAACCCCCCCCCCCACCCCTCCGACTG
CCCCCCCCCCACCCCCCCACACCCCAACACCACCCAGCCCCCGCCCCCGG
ACCGCCCCCCAGACCCGCGAGCTCACCAGACCCGCGCCGCACGATCGAAC
CAGTGCCCGGATAACGCACACGGCGACCCACCGGCGAGCCGGGGCAGCAC
GACGAGGGGA
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