EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP10_NEUCR (ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa GN=dbp-10 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.121e-13 Identity = 41/121 (33.88%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 132 VEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 ++G V K F+ +G ++++ I++ GF PTPIQ + P+ L+ +D++G+A TGSGKT A+++P I + P G L+++P+RELA+Q + + G + +K+ L GG Sbjct: 90 IQGKSVKKG-GGFQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIERLKGH---SPRVGSRALIMSPSRELALQTLKVVKELGRGTDLKTVLLVGG 206
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_SHEWM (ATP-dependent RNA helicase rhlB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rhlB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG---NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 + F D + ++++GF TPIQA P+ L+ +D+ G A+TG+GKTLA+L+ H+ + P +P G N P +++APTRELA+QI +++T + +K +YGG Sbjct: 9 QKFADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFLVATFDHLLSTP-VPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTGLKVGIVYGG 121
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH7_ARATH (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 52/123 (42.28%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 144 DVPKPVKSFRDVGFPDYVMQEISKAGFFEPT-PIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF-----LPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 D P V FR + P ++E KA E PIQA + M L G DL+G A TG GKTLA++LP + + P + G P VLVL PTRELA Q+ + +G S + S CLYGG Sbjct: 93 DNPNAVSKFR-ISAP---LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGG 211
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH36_ORYSJ (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica GN=Os07g0633500 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 165 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 +F ++G +++ G PT +Q + P AL+GRD++GIAETGSGKT A+ LP + + P+ G L LAPTRELA Q+ ++ GA ++ GG Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPY-----GVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGG 182
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH10_ARATH (DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana GN=RH10 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 159 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIVHVNAQPFLPPGNGP----IVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 VK+F ++G + +++ + G+ P+ IQA+ P AL+G+D+IG+A+TGSGKT A+ +P A++ G P VL+PTRELA+QI ++ GA ++ L GG+ Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: HAS1_YARLI (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica GN=HAS1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQI 431 K F + + MQ + GF TP+Q + P L GRD++G A+TGSGKTLA+L+PAI + F P NG V+V++PTRELA+QI Sbjct: 131 KPFSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKLKF-KPRNGTGVIVVSPTRELALQI 219
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: HAS1_PICGU (ATP-dependent RNA helicase HAS1 OS=Pichia guilliermondii GN=HAS1 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 168 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQI 431 F D+G + M+ I GF + T +Q + P L GRD++G A+TGSGKTLA+L+PAI + + F P NG V+V++PTRELA+QI Sbjct: 107 FEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLKF-KPRNGTGVIVVSPTRELALQI 193
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 153 KPVK--------SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 KPVK +F+ + +++ ++ GF +PTPIQ++ P+AL G+D++G A TGSGKT A+++P + + +P P + V +L PTRELA+Q +TK + + IK GG+ Sbjct: 257 KPVKGAKQELNTTFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVLERLLYRPKKVPTSR--VAILMPTRELAIQCHAVATKLASHTDIKFCLAVGGL 377
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: ROK1_ASHGO (ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii GN=ROK1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.913e-13 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 132 VEGPDVPKPVKSFRDV----GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTK 449 V G D P P+ SF D+ ++ + + F EPTPIQ + P++L+ RD++ A TGSGKTLA+L+P + V + + G G L+++PT+ELA QI E +K Sbjct: 109 VTGADAPLPIGSFEDLVTRFKLDKRLLSNLIENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQVISDKAV--GTGVKGLIISPTKELANQIFDECSK 216
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_SHELP (ATP-dependent RNA helicase rhlB OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rhlB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.913e-13 Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG---NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 + F D + Q + ++GF TPIQA P+ L+ +D+ G A+TG+GKTLA+L+ H+ P +P G N P +V+APTRELA+QI ++ + +K +YGG Sbjct: 9 QKFADFSLHPEIQQALVESGFEYCTPIQALSLPILLEHKDIAGQAQTGTGKTLAFLVATFNHLLTTP-IPDGRQLNQPRAIVMAPTRELAIQIAKDGELLAKHTGLKVGIVYGG 121 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |