EY744817

Overview
NameEY744817
Unique NameEY744817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPY (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPS (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPP (ATP-dependent RNA helicase rhlB OS=Yersinia pestis (strain Pestoides F) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPN (ATP-dependent RNA helicase rhlB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPE (ATP-dependent RNA helicase rhlB OS=Yersinia pestis GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPB (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERPA (ATP-dependent RNA helicase rhlB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_YERP3 (ATP-dependent RNA helicase rhlB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP--PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D      V++ +   GF   TPIQA   P+ L GRD+ G A+TG+GKTLA+L     ++ + P       N P  L++APTRELAVQI  ++      + +K    YGG
Sbjct:    9 QKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_SHESR (ATP-dependent RNA helicase rhlB OS=Shewanella sp. (strain MR-7) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 41/114 (35.96%), Postives = 68/114 (59.65%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG---NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D+     V Q +++ GF   TPIQA   P+ L+ +D+ G A+TG+GKT+A+L+    H+ + P +P     N P  +++APTRELA+QI +++      + +K   +YGG
Sbjct:    9 QKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTP-IPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGG 121
[Close]
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RHLB_SHESM (ATP-dependent RNA helicase rhlB OS=Shewanella sp. (strain MR-4) GN=rhlB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.566e-13
Identity = 41/114 (35.96%), Postives = 68/114 (59.65%), Query Frame = 3 
Query:  162 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG---NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + F D+     V Q +++ GF   TPIQA   P+ L+ +D+ G A+TG+GKT+A+L+    H+ + P +P     N P  +++APTRELA+QI +++      + +K   +YGG
Sbjct:    9 QKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTP-IPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGG 121
The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHLB_YERPY5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pseudo... [more]
RHLB_YERPS5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pseudo... [more]
RHLB_YERPP5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pestis... [more]
RHLB_YERPN5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pestis... [more]
RHLB_YERPE5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pestis... [more]
RHLB_YERPB5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pseudo... [more]
RHLB_YERPA5.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pestis... [more]
RHLB_YERP35.566e-1338.05ATP-dependent RNA helicase rhlB OS=Yersinia pseudo... [more]
RHLB_SHESR5.566e-1335.96ATP-dependent RNA helicase rhlB OS=Shewanella sp. ... [more]
RHLB_SHESM5.566e-1335.96ATP-dependent RNA helicase rhlB OS=Shewanella sp. ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAGGAAGTTGGATTTGCCCCCTTTGACTCCTTTTGAGATG
AACTTCTATGTTGAGTCCCCCTCAGTGGCTGCAATGTCGGAGAGGGAAGT
CGAGGAGTATCGACAGCAGAGGGAAATCACAGTTGAAGGTCCCGATGTTC
CAAAACCTGTCAAGAGTTTCCGTGATGTCGGTTTTCCAGATTATGTTATG
CAAGAAATATCAAAAGCTGGCTTTTTTGAACCCACACCTATACAAGCTCA
GGGATGGCCAATGGCTTTGAAAGGTCGTGATCTCATTGGAATTGCTGAAA
CAGGCTCAGGAAAAACTCTGGCTTATCTCTTGCCTGCTATTGTCCATGTT
AATGCCCAGCCATTTTTACCTCCTGGAAATGGCCCAATTGTGCTAGTTCT
AGCTCCAACTCGTGAACTTGCTGTTCAAATACAACAAGAATCTACTAAAT
TTGGTGCATCCTCACAGATTAAAAGTACGTGCCTCTATGGGGGAGTTCCA
CAGGGAACTCCAGTTCCTGATCCGCCCAAGGGTGCCCCCAGTGCCCCCCC
CCCCCCCCCGAGGGTCCCGGCCCCGGCGGACGCCCCTAACGCCCATCCAC
CCAAGCGCCCCTTCCCTTTCCCCCCGCCCCCGCTAACCCGATGNTNCCAC
CCCCACCCCCCCGCCCGCCCGCCCGCGCCCGCCCCGCCCCNCGTCGGNTN
CCAGGGCGTGAAACTCATGCAGTCGCGCCCGAGCCATAGNTNTNNNGTGG
GTNANGTTNGTNTNTCCGGGGTCCCATTCCCCCGGCCACACCCCCCCCCA
CACAGCCCCCCCCTCCCCAGCCCCAACCCCCCCCCCCACCCCTCCGACTG
CCCCCCCCCCACCCCCCCACACCCCAACACCACCCAGCCCCCGCCCCCGG
ACCGCCCCCCAGACCCGCGAGCTCACCAGACCCGCGCCGCACGATCGAAC
CAGTGCCCGGATAACGCACACGGCGACCCACCGGCGAGCCGGGGCAGCAC
GACGAGGGGA
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