EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH45_ORYSJ (DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica GN=Os08g0154200 PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 5.353e-32 Identity = 69/152 (45.39%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF N Y+E + M+ + V G DVPKP+K++ G ++ I K GF +P PIQAQ P+ + GRD IGIA+TGSGKTLA++LP + HV QP + PG+GPI L++APTREL VQI + KF S I +YGG Sbjct: 244 PFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAIYGG 395
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_PONAB (ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 9.131e-32 Identity = 68/164 (41.46%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 24 LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 LPP+ PFE NFY E + ++ + V G P+P SF GF + +M +I K+ + +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PG+GPI +++ PTREL QI E +FG + ++S +YGG Sbjct: 200 LPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGG 363
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_CHICK (ATP-dependent RNA helicase DDX42 OS=Gallus gallus GN=DDX42 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 9.131e-32 Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 3 Query: 24 LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 LPP+ PFE NFY E + +++ + V G P+P SF GF + +M +I K+ + +PTPIQ QG P+A+ GRD+IGIA+TGSGKT A++ P ++H+ Q L PG+GPI +++ PTREL QI E +FG + ++S +YGG Sbjct: 200 LPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGG 363
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH42_ORYSJ (DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica GN=Os08g0159900 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31 Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFY+E + M+ + V G DVPKP+K++ G ++ I K GF +P IQAQ P+ + GRD IGIA+TGSGKTLA++LP + HV QP + PG+GPI L++APTREL VQI + KF + I +YGG Sbjct: 383 PFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGG 534
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_MOUSE (ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31 Identity = 68/164 (41.46%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 24 LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 LPP+ PFE NFY E + ++ + V G P+P SF GF + +M +I K+ + +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PG+GPI +++ PTREL QI E +FG + ++S +YGG Sbjct: 200 LPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_HUMAN (ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31 Identity = 68/164 (41.46%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 24 LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 LPP+ PFE NFY E + ++ + V G P+P SF GF + +M +I K+ + +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PG+GPI +++ PTREL QI E +FG + ++S +YGG Sbjct: 200 LPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_RAT (Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus GN=Ddx46 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFYVE P +A MS ITV+G PKP+KS+ G ++ + K G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G GPI +++ PTRELA+QI +E KF + ++ C+YGG Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_PONAB (Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFYVE P +A MS ITV+G PKP+KS+ G ++ + K G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G GPI +++ PTRELA+QI +E KF + ++ C+YGG Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_MOUSE (Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFYVE P +A MS ITV+G PKP+KS+ G ++ + K G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G GPI +++ PTRELA+QI +E KF + ++ C+YGG Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_HUMAN (Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFYVE P +A MS ITV+G PKP+KS+ G ++ + K G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G GPI +++ PTRELA+QI +E KF + ++ C+YGG Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |