EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_DICDI (Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum GN=ddx42 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.730e-31 Identity = 71/152 (46.71%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 F FY E P +A ++ I + G D+ PV SF GF D ++Q I+K PTPIQ Q P+AL GRDLI IA+TGSGKT ++ P+I H+ QP+L G+GPI L LAPTRELA QI E+ K+ ++K+T LYGGV Sbjct: 265 FNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGV 416
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX42_XENLA (ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30 Identity = 69/172 (40.12%), Postives = 100/172 (58.14%), Query Frame = 3 Query: 3 TRPRKLD-LPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 T R +D LPP+ PFE NFY E ++ + + + V G P+ SF GF + ++ +I K+ + +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P +VH+ Q L P +GPI +++ PTREL QI E +FG + ++S +YGG Sbjct: 189 TTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGG 360
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_DICDI (ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum GN=helB1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.836e-30 Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 F+ NFY+E P +A M+ + + G D PKP++S+ G + V + K + +PT IQAQ P + GRDLIGIA TGSGKTLA+LLP H+ AQP PG G I L+++PTRELA+QI E KF +++ C+YGG Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGG 619
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH24_ARATH (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana GN=RH24 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.458e-29 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 P +FY E S++ M+ I V G DV +PVK+F D GF +M I K + +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP IVH+ QP L GPI ++ APTRELA QI E+ KF + ++ + +YGG+ Sbjct: 187 PINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGM 339
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX46_DANRE (Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.248e-29 Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFYVE P +A MS I+V+G PKP+K++ G V+ + K + +PTPIQAQ P + GRDLIGIA+TGSGKT+A+LLP H+ Q + GP+ +++ PTRELA+QI +E KF S ++ C+YGG Sbjct: 298 PFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGG 450
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX17_TRYBB (Putative DEAD-box RNA helicase HEL64 OS=Trypanosoma brucei brucei GN=HEL64 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 5.540e-29 Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 66 SPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVG--FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 +P +S IT+ G D P P+ SF + P Y++++++ F PTP+QAQ WP+ L GRDL+G+A+TGSGKTL +++PA+ H+ Q L G+GP+V+VLAPTRELA QI++E TK + C+YGG P+G Sbjct: 68 TPEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEE-TKKVIPGDVYCGCVYGGAPKG 215
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 3.591e-28 Identity = 60/152 (39.47%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFY+E ++ M+ + V G DVP+P+K + G ++ + K + +P PIQ Q P+ + GRD IG+A+TGSGKTL ++LP + H+ QP + G+GPI LV+APTREL QI + KF I+ +YGG Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGG 639
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH45_ARATH (DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana GN=RH45 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.000e-28 Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF NFY+E ++ M+ + V G DVP+P++ + G ++ + K + +P PIQAQ P+ + GRD IG+A+TGSGKTL ++LP + H+ QP + G+GPI LV+APTREL QI + KF + I +YGG Sbjct: 355 PFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGG 506
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_USTMA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago maydis GN=PRP5 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.040e-27 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 PF FY + MS ITV G D PKP+ + G P + I + G+ PTPIQ+Q P + GRD+IG+A+TGSGKT+A+LLP H+ Q + P GP+ +++ PTRELAVQI +E F + +++ C+YGG P Sbjct: 434 PFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAP 588
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_LODEL (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces elongisporus GN=PRP5 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.185e-27 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISK-AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 + G +VP P ++ + P+ VM I GF +P+PIQ Q P+ L GRD+IG+A+TGSGKTL+Y+LP + H+ Q F PG GPI LVL+PTRELA+QI++E KF ++ +K C YGG Sbjct: 375 VRARGKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGG 498 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |