EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_BOTFB (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.185e-27 Identity = 68/160 (42.50%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 18 LDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 LDLPP F NFY E +A M+ I V G DVPKPV+ + G + I+K G+ PT IQ Q P + GRD+IG+A+TGSGKT+A+LLP H+ Q L +GPI L++ PTRELA QI +E F + +++ C YGG Sbjct: 508 LDLPP---FRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGG 664
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PHANO (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Phaeosphaeria nodorum GN=PRP5 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 6.772e-27 Identity = 69/155 (44.52%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 PF +FY E + MS I V+ DVP+PV + +G M ++ G+ PT IQAQ P+A GRDLIG+A+TGSGKTLA+ +P I HV Q L P +GPI L+LAPTREL++QI E F +S I C YGG P Sbjct: 502 PFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQP 656
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PICGU (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pichia guilliermondii GN=PRP5 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 8.845e-27 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 I V G D P P++ + +G P +M + K G+ P+PIQ+Q P + GRD+IG+A TGSGKTLA+++P I H+ QP L G+GPI ++L PTRELA+QIQ+E F + ++ C YGG P Sbjct: 254 IKVRGSDCPMPIQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSGDGPIGVILTPTRELALQIQKELVNFTQAVELSVCCCYGGSP 379
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX43_HUMAN (Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26 Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGPDVPKPVKSFRDVG--FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP-PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 DLPP+ + NFY ES + +AMS E +P P +F D +P+ VM+ I KAGF +PTPIQ+Q WP+ L+G DLIG+A+TG+GKTL YL+P +H+ QP L N P +LVL PTRELA+Q++ E K+ ++S C+YGG Sbjct: 190 DLPPI---KKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGG 352
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX23_PONAB (Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26 Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL----PPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 IT +G +P P++S++D P ++++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETGSGKT A+L+P +V + P + GP ++LAPTRELA QI++E+ KFG I++ + GG+ Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGI 506
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX23_HUMAN (Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26 Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL----PPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497 IT +G +P P++S++D P ++++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETGSGKT A+L+P +V + P + GP ++LAPTRELA QI++E+ KFG I++ + GG+ Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGI 506
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_GIBZE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae GN=PRP5 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.509e-26 Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + P NF+ E ++ ++ I V G DVPKPV+ + G + + G+ +PTPIQ Q P + GRD+IG+A+TGSGKT+A+LLP H+ QP L +GPI L++ PTRELAVQI ++ F +++ C YGG P Sbjct: 539 KKKDIPTIDYSKIEIEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAP 709
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_COCIM (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis GN=PRP5 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.970e-26 Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K DLP + PF +FY E +A ++ I V G DVPKPV+ + G + I K G+ +PT IQ+Q P + GRD+IG+A+TGSGKT+A+LLP H+ Q L GP+ L++ PTRELA QI +E F + +++ C YGG P Sbjct: 501 KKKDLPTVNHETIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAP 671
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_SCLS1 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.389e-26 Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 12 RKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 +K D+P L PF NFY E + M+ I V G DVPKPV+ + G + I K G+ +PT IQ Q P + GRD+IG+A+TGSGKT+A+LLP H+ Q L +GPI L++ PTRELA QI +E F + +++ C YGG Sbjct: 425 KKKDIPTINYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGG 593
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_YEAST (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae GN=PRP5 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 33 LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ-PFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494 L PF+ NFY+ES +V++MS I ++G PKPV + +G M I+ K F TPIQ+Q P + GRD+IGI++TGSGKT++YLLP + V AQ P GP+ L+LAPTRELA+QI +E TKF A + I+S C GG Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGG 368 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |