EY744817

Overview
NameEY744817
Unique NameEY744817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_BOTFB (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.185e-27
Identity = 68/160 (42.50%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   18 LDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            LDLPP   F  NFY E   +A M+             I V G DVPKPV+ +   G     +  I+K G+  PT IQ Q  P  + GRD+IG+A+TGSGKT+A+LLP   H+  Q  L   +GPI L++ PTRELA QI +E   F  +  +++ C YGG
Sbjct:  508 LDLPP---FRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGG 664          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PHANO (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Phaeosphaeria nodorum GN=PRP5 PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.772e-27
Identity = 69/155 (44.52%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   39 PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            PF  +FY E   +  MS             I V+  DVP+PV  +  +G     M   ++ G+  PT IQAQ  P+A  GRDLIG+A+TGSGKTLA+ +P I HV  Q  L P +GPI L+LAPTREL++QI  E   F  +S I   C YGG P
Sbjct:  502 PFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQP 656          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PICGU (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pichia guilliermondii GN=PRP5 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 8.845e-27
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            I V G D P P++ +  +G P  +M  +  K G+  P+PIQ+Q  P  + GRD+IG+A TGSGKTLA+++P I H+  QP L  G+GPI ++L PTRELA+QIQ+E   F  + ++   C YGG P
Sbjct:  254 IKVRGSDCPMPIQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSGDGPIGVILTPTRELALQIQKELVNFTQAVELSVCCCYGGSP 379          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX43_HUMAN (Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26
Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = 3
Query:   21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGPDVPKPVKSFRDVG--FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLP-PGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            DLPP+   + NFY ES + +AMS                      E   +P P  +F D    +P+ VM+ I KAGF +PTPIQ+Q WP+ L+G DLIG+A+TG+GKTL YL+P  +H+  QP L    N P +LVL PTRELA+Q++ E  K+     ++S C+YGG
Sbjct:  190 DLPPI---KKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGG 352          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX23_PONAB (Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26
Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL----PPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497
            IT +G  +P P++S++D   P ++++ I K G+ EPTPIQ Q  P+ L+ RD+IG+AETGSGKT A+L+P +V +   P +        GP  ++LAPTRELA QI++E+ KFG    I++  + GG+
Sbjct:  379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGI 506          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX23_HUMAN (Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.155e-26
Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL----PPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGV 497
            IT +G  +P P++S++D   P ++++ I K G+ EPTPIQ Q  P+ L+ RD+IG+AETGSGKT A+L+P +V +   P +        GP  ++LAPTRELA QI++E+ KFG    I++  + GG+
Sbjct:  379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGI 506          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_GIBZE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae GN=PRP5 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.509e-26
Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        P   NF+ E   ++ ++             I V G DVPKPV+ +   G     +  +   G+ +PTPIQ Q  P  + GRD+IG+A+TGSGKT+A+LLP   H+  QP L   +GPI L++ PTRELAVQI ++   F     +++ C YGG P
Sbjct:  539 KKKDIPTIDYSKIEIEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAP 709          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_COCIM (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis GN=PRP5 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.970e-26
Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K DLP +        PF  +FY E   +A ++             I V G DVPKPV+ +   G     +  I K G+ +PT IQ+Q  P  + GRD+IG+A+TGSGKT+A+LLP   H+  Q  L    GP+ L++ PTRELA QI +E   F  +  +++ C YGG P
Sbjct:  501 KKKDLPTVNHETIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAP 671          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_SCLS1 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.389e-26
Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 3
Query:   12 RKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            +K D+P        L PF  NFY E   +  M+             I V G DVPKPV+ +   G     +  I K G+ +PT IQ Q  P  + GRD+IG+A+TGSGKT+A+LLP   H+  Q  L   +GPI L++ PTRELA QI +E   F  +  +++ C YGG
Sbjct:  425 KKKDIPTINYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGG 593          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_YEAST (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae GN=PRP5 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   33 LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ-PFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494
            L PF+ NFY+ES +V++MS             I ++G   PKPV  +  +G     M  I+ K  F   TPIQ+Q  P  + GRD+IGI++TGSGKT++YLLP +  V AQ P      GP+ L+LAPTRELA+QI +E TKF  A + I+S C  GG
Sbjct:  211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGG 368          
The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRP5_BOTFB5.185e-2742.50Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_PHANO6.772e-2744.52Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_PICGU8.845e-2746.03Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
DDX43_HUMAN1.155e-2642.86Probable ATP-dependent RNA helicase DDX43 OS=Homo ... [more]
DDX23_PONAB1.155e-2643.75Probable ATP-dependent RNA helicase DDX23 OS=Pongo... [more]
DDX23_HUMAN1.155e-2643.75Probable ATP-dependent RNA helicase DDX23 OS=Homo ... [more]
PRP5_GIBZE1.509e-2637.43Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_COCIM1.970e-2638.60Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_SCLS14.389e-2639.64Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_YEAST7.487e-2644.94Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAGGAAGTTGGATTTGCCCCCTTTGACTCCTTTTGAGATG
AACTTCTATGTTGAGTCCCCCTCAGTGGCTGCAATGTCGGAGAGGGAAGT
CGAGGAGTATCGACAGCAGAGGGAAATCACAGTTGAAGGTCCCGATGTTC
CAAAACCTGTCAAGAGTTTCCGTGATGTCGGTTTTCCAGATTATGTTATG
CAAGAAATATCAAAAGCTGGCTTTTTTGAACCCACACCTATACAAGCTCA
GGGATGGCCAATGGCTTTGAAAGGTCGTGATCTCATTGGAATTGCTGAAA
CAGGCTCAGGAAAAACTCTGGCTTATCTCTTGCCTGCTATTGTCCATGTT
AATGCCCAGCCATTTTTACCTCCTGGAAATGGCCCAATTGTGCTAGTTCT
AGCTCCAACTCGTGAACTTGCTGTTCAAATACAACAAGAATCTACTAAAT
TTGGTGCATCCTCACAGATTAAAAGTACGTGCCTCTATGGGGGAGTTCCA
CAGGGAACTCCAGTTCCTGATCCGCCCAAGGGTGCCCCCAGTGCCCCCCC
CCCCCCCCCGAGGGTCCCGGCCCCGGCGGACGCCCCTAACGCCCATCCAC
CCAAGCGCCCCTTCCCTTTCCCCCCGCCCCCGCTAACCCGATGNTNCCAC
CCCCACCCCCCCGCCCGCCCGCCCGCGCCCGCCCCGCCCCNCGTCGGNTN
CCAGGGCGTGAAACTCATGCAGTCGCGCCCGAGCCATAGNTNTNNNGTGG
GTNANGTTNGTNTNTCCGGGGTCCCATTCCCCCGGCCACACCCCCCCCCA
CACAGCCCCCCCCTCCCCAGCCCCAACCCCCCCCCCCACCCCTCCGACTG
CCCCCCCCCCACCCCCCCACACCCCAACACCACCCAGCCCCCGCCCCCGG
ACCGCCCCCCAGACCCGCGAGCTCACCAGACCCGCGCCGCACGATCGAAC
CAGTGCCCGGATAACGCACACGGCGACCCACCGGCGAGCCGGGGCAGCAC
GACGAGGGGA
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